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C1R, CCL2, and TNFRSF1A Genes in Coronavirus Disease-COVID-19 Pathway Serve as Novel Molecular Biomarkers of GBM Prognosis and Immune Infiltration

Glioblastoma multiforme (GBM) is a prevalent intracranial brain tumor associated with a high rate of recurrence and treatment difficulty. The prediction of novel molecular biomarkers through bioinformatics analysis may provide new clues into early detection and eventual treatment of GBM. Here, we us...

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Autores principales: Wang, Xianggang, Yang, Guohua, Wang, Qingqing, Zhao, Yilong, Ding, Kaixin, Ji, Can, Shi, Zongyuan, Li, Huaying, Li, Ying, Li, Shujing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9206210/
https://www.ncbi.nlm.nih.gov/pubmed/35726234
http://dx.doi.org/10.1155/2022/8602068
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author Wang, Xianggang
Yang, Guohua
Wang, Qingqing
Zhao, Yilong
Ding, Kaixin
Ji, Can
Shi, Zongyuan
Li, Huaying
Li, Ying
Li, Shujing
author_facet Wang, Xianggang
Yang, Guohua
Wang, Qingqing
Zhao, Yilong
Ding, Kaixin
Ji, Can
Shi, Zongyuan
Li, Huaying
Li, Ying
Li, Shujing
author_sort Wang, Xianggang
collection PubMed
description Glioblastoma multiforme (GBM) is a prevalent intracranial brain tumor associated with a high rate of recurrence and treatment difficulty. The prediction of novel molecular biomarkers through bioinformatics analysis may provide new clues into early detection and eventual treatment of GBM. Here, we used data from the GTEx and TCGA databases to identify 1923 differentially expressed genes (DEGs). GO and KEGG analyses indicated that DEGs were significantly enriched in immune response and coronavirus disease-COVID-19 pathways. Survival analyses revealed a significant correlation between high expression of C1R, CCL2, and TNFRSF1A in the coronavirus disease-COVID-19 pathway and the poor survival in GBM patients. Cell experiments indicated that the mRNA expression levels of C1R, CCL2, and TNFRSF1A in GBM cells were very high. Immune infiltration analysis revealed a significant difference in the proportion of immune cells in tumor and normal tissue, and the expression levels of C1R, CCL2, and TNFRSF1A were associated with immune cell infiltration of GBM. Additionally, the protein-protein interaction networks of C1R, CCL2, and TNFRSF1A involved a total of 65 nodes and 615 edges. These results suggest that C1R, CCL2, and TNFRSF1A may be used as molecular biomarkers of prognosis and immune infiltration in GBM patients in the future.
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spelling pubmed-92062102022-06-19 C1R, CCL2, and TNFRSF1A Genes in Coronavirus Disease-COVID-19 Pathway Serve as Novel Molecular Biomarkers of GBM Prognosis and Immune Infiltration Wang, Xianggang Yang, Guohua Wang, Qingqing Zhao, Yilong Ding, Kaixin Ji, Can Shi, Zongyuan Li, Huaying Li, Ying Li, Shujing Dis Markers Research Article Glioblastoma multiforme (GBM) is a prevalent intracranial brain tumor associated with a high rate of recurrence and treatment difficulty. The prediction of novel molecular biomarkers through bioinformatics analysis may provide new clues into early detection and eventual treatment of GBM. Here, we used data from the GTEx and TCGA databases to identify 1923 differentially expressed genes (DEGs). GO and KEGG analyses indicated that DEGs were significantly enriched in immune response and coronavirus disease-COVID-19 pathways. Survival analyses revealed a significant correlation between high expression of C1R, CCL2, and TNFRSF1A in the coronavirus disease-COVID-19 pathway and the poor survival in GBM patients. Cell experiments indicated that the mRNA expression levels of C1R, CCL2, and TNFRSF1A in GBM cells were very high. Immune infiltration analysis revealed a significant difference in the proportion of immune cells in tumor and normal tissue, and the expression levels of C1R, CCL2, and TNFRSF1A were associated with immune cell infiltration of GBM. Additionally, the protein-protein interaction networks of C1R, CCL2, and TNFRSF1A involved a total of 65 nodes and 615 edges. These results suggest that C1R, CCL2, and TNFRSF1A may be used as molecular biomarkers of prognosis and immune infiltration in GBM patients in the future. Hindawi 2022-06-18 /pmc/articles/PMC9206210/ /pubmed/35726234 http://dx.doi.org/10.1155/2022/8602068 Text en Copyright © 2022 Xianggang Wang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Wang, Xianggang
Yang, Guohua
Wang, Qingqing
Zhao, Yilong
Ding, Kaixin
Ji, Can
Shi, Zongyuan
Li, Huaying
Li, Ying
Li, Shujing
C1R, CCL2, and TNFRSF1A Genes in Coronavirus Disease-COVID-19 Pathway Serve as Novel Molecular Biomarkers of GBM Prognosis and Immune Infiltration
title C1R, CCL2, and TNFRSF1A Genes in Coronavirus Disease-COVID-19 Pathway Serve as Novel Molecular Biomarkers of GBM Prognosis and Immune Infiltration
title_full C1R, CCL2, and TNFRSF1A Genes in Coronavirus Disease-COVID-19 Pathway Serve as Novel Molecular Biomarkers of GBM Prognosis and Immune Infiltration
title_fullStr C1R, CCL2, and TNFRSF1A Genes in Coronavirus Disease-COVID-19 Pathway Serve as Novel Molecular Biomarkers of GBM Prognosis and Immune Infiltration
title_full_unstemmed C1R, CCL2, and TNFRSF1A Genes in Coronavirus Disease-COVID-19 Pathway Serve as Novel Molecular Biomarkers of GBM Prognosis and Immune Infiltration
title_short C1R, CCL2, and TNFRSF1A Genes in Coronavirus Disease-COVID-19 Pathway Serve as Novel Molecular Biomarkers of GBM Prognosis and Immune Infiltration
title_sort c1r, ccl2, and tnfrsf1a genes in coronavirus disease-covid-19 pathway serve as novel molecular biomarkers of gbm prognosis and immune infiltration
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9206210/
https://www.ncbi.nlm.nih.gov/pubmed/35726234
http://dx.doi.org/10.1155/2022/8602068
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