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Population structure in Quercus suber L. revealed by nuclear microsatellite markers

Quercus suber L. is a sclerophyllous tree species native to the western Mediterranean, a region that is considered highly vulnerable to increased temperatures and severe dry conditions due to environmental changes. Understanding the population structure and demographics of Q. suber is essential in o...

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Autores principales: Sousa, Filipe, Costa, Joana, Ribeiro, Carla, Varandas, Marta, Pina-Martins, Francisco, Simões, Fernanda, Matos, José, Glushkova, Maria, Miguel, Célia, Veloso, Maria Manuela, Oliveira, Margarida, Pinto Ricardo, Cândido, Batista, Dora, Paulo, Octávio S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9206845/
https://www.ncbi.nlm.nih.gov/pubmed/35729909
http://dx.doi.org/10.7717/peerj.13565
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author Sousa, Filipe
Costa, Joana
Ribeiro, Carla
Varandas, Marta
Pina-Martins, Francisco
Simões, Fernanda
Matos, José
Glushkova, Maria
Miguel, Célia
Veloso, Maria Manuela
Oliveira, Margarida
Pinto Ricardo, Cândido
Batista, Dora
Paulo, Octávio S.
author_facet Sousa, Filipe
Costa, Joana
Ribeiro, Carla
Varandas, Marta
Pina-Martins, Francisco
Simões, Fernanda
Matos, José
Glushkova, Maria
Miguel, Célia
Veloso, Maria Manuela
Oliveira, Margarida
Pinto Ricardo, Cândido
Batista, Dora
Paulo, Octávio S.
author_sort Sousa, Filipe
collection PubMed
description Quercus suber L. is a sclerophyllous tree species native to the western Mediterranean, a region that is considered highly vulnerable to increased temperatures and severe dry conditions due to environmental changes. Understanding the population structure and demographics of Q. suber is essential in order to anticipate whether populations at greater risk and the species as a whole have the genetic background and reproductive dynamics to enable rapid adaptation. The genetic diversity of Q. suber has been subject to different studies using both chloroplast and nuclear data, but population structure patterns remain unclear. Here, we perform genetic analyses on Q. suber using 13 nuclear microsatellite markers, and analysed 17 distinct locations across the entire range of the species. Structure analyses revealed that Q. suber may contain three major genetic clusters that likely result from isolation in refugia combined with posterior admixture and putative introgression from other Quercus species. Our results show a more complex structure scenario than previously inferred for Q. suber using nuclear markers and suggest that different southern populations contain high levels of genetic variation that may contribute to the resilience of Q. suber in a context of environmental change and adaptive pressure.
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spelling pubmed-92068452022-06-20 Population structure in Quercus suber L. revealed by nuclear microsatellite markers Sousa, Filipe Costa, Joana Ribeiro, Carla Varandas, Marta Pina-Martins, Francisco Simões, Fernanda Matos, José Glushkova, Maria Miguel, Célia Veloso, Maria Manuela Oliveira, Margarida Pinto Ricardo, Cândido Batista, Dora Paulo, Octávio S. PeerJ Biodiversity Quercus suber L. is a sclerophyllous tree species native to the western Mediterranean, a region that is considered highly vulnerable to increased temperatures and severe dry conditions due to environmental changes. Understanding the population structure and demographics of Q. suber is essential in order to anticipate whether populations at greater risk and the species as a whole have the genetic background and reproductive dynamics to enable rapid adaptation. The genetic diversity of Q. suber has been subject to different studies using both chloroplast and nuclear data, but population structure patterns remain unclear. Here, we perform genetic analyses on Q. suber using 13 nuclear microsatellite markers, and analysed 17 distinct locations across the entire range of the species. Structure analyses revealed that Q. suber may contain three major genetic clusters that likely result from isolation in refugia combined with posterior admixture and putative introgression from other Quercus species. Our results show a more complex structure scenario than previously inferred for Q. suber using nuclear markers and suggest that different southern populations contain high levels of genetic variation that may contribute to the resilience of Q. suber in a context of environmental change and adaptive pressure. PeerJ Inc. 2022-06-16 /pmc/articles/PMC9206845/ /pubmed/35729909 http://dx.doi.org/10.7717/peerj.13565 Text en ©2022 Sousa et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Biodiversity
Sousa, Filipe
Costa, Joana
Ribeiro, Carla
Varandas, Marta
Pina-Martins, Francisco
Simões, Fernanda
Matos, José
Glushkova, Maria
Miguel, Célia
Veloso, Maria Manuela
Oliveira, Margarida
Pinto Ricardo, Cândido
Batista, Dora
Paulo, Octávio S.
Population structure in Quercus suber L. revealed by nuclear microsatellite markers
title Population structure in Quercus suber L. revealed by nuclear microsatellite markers
title_full Population structure in Quercus suber L. revealed by nuclear microsatellite markers
title_fullStr Population structure in Quercus suber L. revealed by nuclear microsatellite markers
title_full_unstemmed Population structure in Quercus suber L. revealed by nuclear microsatellite markers
title_short Population structure in Quercus suber L. revealed by nuclear microsatellite markers
title_sort population structure in quercus suber l. revealed by nuclear microsatellite markers
topic Biodiversity
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9206845/
https://www.ncbi.nlm.nih.gov/pubmed/35729909
http://dx.doi.org/10.7717/peerj.13565
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