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Genomic status of yellow-breasted bunting following recent rapid population decline
Global biodiversity is facing serious threats. However, knowledge of the genomic consequences of recent rapid population declines of wild organisms is limited. Do populations experiencing recent rapid population decline have the same genomic status as wild populations that experience long-term decli...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9207672/ https://www.ncbi.nlm.nih.gov/pubmed/35733787 http://dx.doi.org/10.1016/j.isci.2022.104501 |
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author | Wang, Pengcheng Hou, Rong Wu, Yang Zhang, Zhengwang Que, Pinjia Chen, Peng |
author_facet | Wang, Pengcheng Hou, Rong Wu, Yang Zhang, Zhengwang Que, Pinjia Chen, Peng |
author_sort | Wang, Pengcheng |
collection | PubMed |
description | Global biodiversity is facing serious threats. However, knowledge of the genomic consequences of recent rapid population declines of wild organisms is limited. Do populations experiencing recent rapid population decline have the same genomic status as wild populations that experience long-term declines? Yellow-breasted Bunting (Emberiza aureola) is a critically endangered species that has been experiencing a recent rapid population decline. To answer the question, we assembled and annotated the whole genome of Yellow-breasted Bunting. Furthermore, we found high genetic diversity, low linkage disequilibrium, and low proportion of long runs of homozygosity in Yellow-breasted Bunting, suggesting that the populations following recent rapid declines have different genomic statuses from the population that experienced long-term population decline. |
format | Online Article Text |
id | pubmed-9207672 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-92076722022-06-21 Genomic status of yellow-breasted bunting following recent rapid population decline Wang, Pengcheng Hou, Rong Wu, Yang Zhang, Zhengwang Que, Pinjia Chen, Peng iScience Article Global biodiversity is facing serious threats. However, knowledge of the genomic consequences of recent rapid population declines of wild organisms is limited. Do populations experiencing recent rapid population decline have the same genomic status as wild populations that experience long-term declines? Yellow-breasted Bunting (Emberiza aureola) is a critically endangered species that has been experiencing a recent rapid population decline. To answer the question, we assembled and annotated the whole genome of Yellow-breasted Bunting. Furthermore, we found high genetic diversity, low linkage disequilibrium, and low proportion of long runs of homozygosity in Yellow-breasted Bunting, suggesting that the populations following recent rapid declines have different genomic statuses from the population that experienced long-term population decline. Elsevier 2022-06-02 /pmc/articles/PMC9207672/ /pubmed/35733787 http://dx.doi.org/10.1016/j.isci.2022.104501 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Wang, Pengcheng Hou, Rong Wu, Yang Zhang, Zhengwang Que, Pinjia Chen, Peng Genomic status of yellow-breasted bunting following recent rapid population decline |
title | Genomic status of yellow-breasted bunting following recent rapid population decline |
title_full | Genomic status of yellow-breasted bunting following recent rapid population decline |
title_fullStr | Genomic status of yellow-breasted bunting following recent rapid population decline |
title_full_unstemmed | Genomic status of yellow-breasted bunting following recent rapid population decline |
title_short | Genomic status of yellow-breasted bunting following recent rapid population decline |
title_sort | genomic status of yellow-breasted bunting following recent rapid population decline |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9207672/ https://www.ncbi.nlm.nih.gov/pubmed/35733787 http://dx.doi.org/10.1016/j.isci.2022.104501 |
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