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Genomic status of yellow-breasted bunting following recent rapid population decline

Global biodiversity is facing serious threats. However, knowledge of the genomic consequences of recent rapid population declines of wild organisms is limited. Do populations experiencing recent rapid population decline have the same genomic status as wild populations that experience long-term decli...

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Detalles Bibliográficos
Autores principales: Wang, Pengcheng, Hou, Rong, Wu, Yang, Zhang, Zhengwang, Que, Pinjia, Chen, Peng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9207672/
https://www.ncbi.nlm.nih.gov/pubmed/35733787
http://dx.doi.org/10.1016/j.isci.2022.104501
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author Wang, Pengcheng
Hou, Rong
Wu, Yang
Zhang, Zhengwang
Que, Pinjia
Chen, Peng
author_facet Wang, Pengcheng
Hou, Rong
Wu, Yang
Zhang, Zhengwang
Que, Pinjia
Chen, Peng
author_sort Wang, Pengcheng
collection PubMed
description Global biodiversity is facing serious threats. However, knowledge of the genomic consequences of recent rapid population declines of wild organisms is limited. Do populations experiencing recent rapid population decline have the same genomic status as wild populations that experience long-term declines? Yellow-breasted Bunting (Emberiza aureola) is a critically endangered species that has been experiencing a recent rapid population decline. To answer the question, we assembled and annotated the whole genome of Yellow-breasted Bunting. Furthermore, we found high genetic diversity, low linkage disequilibrium, and low proportion of long runs of homozygosity in Yellow-breasted Bunting, suggesting that the populations following recent rapid declines have different genomic statuses from the population that experienced long-term population decline.
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spelling pubmed-92076722022-06-21 Genomic status of yellow-breasted bunting following recent rapid population decline Wang, Pengcheng Hou, Rong Wu, Yang Zhang, Zhengwang Que, Pinjia Chen, Peng iScience Article Global biodiversity is facing serious threats. However, knowledge of the genomic consequences of recent rapid population declines of wild organisms is limited. Do populations experiencing recent rapid population decline have the same genomic status as wild populations that experience long-term declines? Yellow-breasted Bunting (Emberiza aureola) is a critically endangered species that has been experiencing a recent rapid population decline. To answer the question, we assembled and annotated the whole genome of Yellow-breasted Bunting. Furthermore, we found high genetic diversity, low linkage disequilibrium, and low proportion of long runs of homozygosity in Yellow-breasted Bunting, suggesting that the populations following recent rapid declines have different genomic statuses from the population that experienced long-term population decline. Elsevier 2022-06-02 /pmc/articles/PMC9207672/ /pubmed/35733787 http://dx.doi.org/10.1016/j.isci.2022.104501 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Wang, Pengcheng
Hou, Rong
Wu, Yang
Zhang, Zhengwang
Que, Pinjia
Chen, Peng
Genomic status of yellow-breasted bunting following recent rapid population decline
title Genomic status of yellow-breasted bunting following recent rapid population decline
title_full Genomic status of yellow-breasted bunting following recent rapid population decline
title_fullStr Genomic status of yellow-breasted bunting following recent rapid population decline
title_full_unstemmed Genomic status of yellow-breasted bunting following recent rapid population decline
title_short Genomic status of yellow-breasted bunting following recent rapid population decline
title_sort genomic status of yellow-breasted bunting following recent rapid population decline
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9207672/
https://www.ncbi.nlm.nih.gov/pubmed/35733787
http://dx.doi.org/10.1016/j.isci.2022.104501
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