Cargando…
Programming Molecular Systems To Emulate a Learning Spiking Neuron
[Image: see text] Hebbian theory seeks to explain how the neurons in the brain adapt to stimuli to enable learning. An interesting feature of Hebbian learning is that it is an unsupervised method and, as such, does not require feedback, making it suitable in contexts where systems have to learn auto...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9208023/ https://www.ncbi.nlm.nih.gov/pubmed/35622431 http://dx.doi.org/10.1021/acssynbio.1c00625 |
_version_ | 1784729651222937600 |
---|---|
author | Fil, Jakub Dalchau, Neil Chu, Dominique |
author_facet | Fil, Jakub Dalchau, Neil Chu, Dominique |
author_sort | Fil, Jakub |
collection | PubMed |
description | [Image: see text] Hebbian theory seeks to explain how the neurons in the brain adapt to stimuli to enable learning. An interesting feature of Hebbian learning is that it is an unsupervised method and, as such, does not require feedback, making it suitable in contexts where systems have to learn autonomously. This paper explores how molecular systems can be designed to show such protointelligent behaviors and proposes the first chemical reaction network (CRN) that can exhibit autonomous Hebbian learning across arbitrarily many input channels. The system emulates a spiking neuron, and we demonstrate that it can learn statistical biases of incoming inputs. The basic CRN is a minimal, thermodynamically plausible set of microreversible chemical equations that can be analyzed with respect to their energy requirements. However, to explore how such chemical systems might be engineered de novo, we also propose an extended version based on enzyme-driven compartmentalized reactions. Finally, we show how a purely DNA system, built upon the paradigm of DNA strand displacement, can realize neuronal dynamics. Our analysis provides a compelling blueprint for exploring autonomous learning in biological settings, bringing us closer to realizing real synthetic biological intelligence. |
format | Online Article Text |
id | pubmed-9208023 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-92080232022-06-21 Programming Molecular Systems To Emulate a Learning Spiking Neuron Fil, Jakub Dalchau, Neil Chu, Dominique ACS Synth Biol [Image: see text] Hebbian theory seeks to explain how the neurons in the brain adapt to stimuli to enable learning. An interesting feature of Hebbian learning is that it is an unsupervised method and, as such, does not require feedback, making it suitable in contexts where systems have to learn autonomously. This paper explores how molecular systems can be designed to show such protointelligent behaviors and proposes the first chemical reaction network (CRN) that can exhibit autonomous Hebbian learning across arbitrarily many input channels. The system emulates a spiking neuron, and we demonstrate that it can learn statistical biases of incoming inputs. The basic CRN is a minimal, thermodynamically plausible set of microreversible chemical equations that can be analyzed with respect to their energy requirements. However, to explore how such chemical systems might be engineered de novo, we also propose an extended version based on enzyme-driven compartmentalized reactions. Finally, we show how a purely DNA system, built upon the paradigm of DNA strand displacement, can realize neuronal dynamics. Our analysis provides a compelling blueprint for exploring autonomous learning in biological settings, bringing us closer to realizing real synthetic biological intelligence. American Chemical Society 2022-05-27 2022-06-17 /pmc/articles/PMC9208023/ /pubmed/35622431 http://dx.doi.org/10.1021/acssynbio.1c00625 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Fil, Jakub Dalchau, Neil Chu, Dominique Programming Molecular Systems To Emulate a Learning Spiking Neuron |
title | Programming Molecular Systems To Emulate a Learning
Spiking Neuron |
title_full | Programming Molecular Systems To Emulate a Learning
Spiking Neuron |
title_fullStr | Programming Molecular Systems To Emulate a Learning
Spiking Neuron |
title_full_unstemmed | Programming Molecular Systems To Emulate a Learning
Spiking Neuron |
title_short | Programming Molecular Systems To Emulate a Learning
Spiking Neuron |
title_sort | programming molecular systems to emulate a learning
spiking neuron |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9208023/ https://www.ncbi.nlm.nih.gov/pubmed/35622431 http://dx.doi.org/10.1021/acssynbio.1c00625 |
work_keys_str_mv | AT filjakub programmingmolecularsystemstoemulatealearningspikingneuron AT dalchauneil programmingmolecularsystemstoemulatealearningspikingneuron AT chudominique programmingmolecularsystemstoemulatealearningspikingneuron |