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Discriminating TB lung nodules from early lung cancers using deep learning

BACKGROUND: In developing countries where both high rates of smoking and endemic tuberculosis (TB) are often present, identification of early lung cancer can be significantly confounded by the presence of nodules such as those due to latent TB (LTB). It is very challenging to distinguish lung cancer...

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Autores principales: Tan, Heng, Bates, Jason H. T., Matthew Kinsey, C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9210663/
https://www.ncbi.nlm.nih.gov/pubmed/35725445
http://dx.doi.org/10.1186/s12911-022-01904-8
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author Tan, Heng
Bates, Jason H. T.
Matthew Kinsey, C.
author_facet Tan, Heng
Bates, Jason H. T.
Matthew Kinsey, C.
author_sort Tan, Heng
collection PubMed
description BACKGROUND: In developing countries where both high rates of smoking and endemic tuberculosis (TB) are often present, identification of early lung cancer can be significantly confounded by the presence of nodules such as those due to latent TB (LTB). It is very challenging to distinguish lung cancer and LTB without invasive procedures, which have their own risks of morbidity and even mortality. METHODS: Our method uses a customized VGG16-based 15-layer 2-dimensional deep convolutional neural network (DNN) architecture with transfer learning. The DNN was trained and tested on sets of CT images set extracted from the National Lung Screening Trial and the National Institute of Allergy and Infectious Disease TB Portals. Performance of the DNN was evaluated under locked and step-wise unlocked pretrained weight conditions. RESULTS: The DNN with unlocked pretrained weights achieved an accuracy of 90.4% with an F score of 90.1%. CONCLUSIONS: Our findings support the potential for a DNN to serve as a noninvasive screening tool capable of reliably detecting and distinguishing between lung cancer and LTB.
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spelling pubmed-92106632022-06-22 Discriminating TB lung nodules from early lung cancers using deep learning Tan, Heng Bates, Jason H. T. Matthew Kinsey, C. BMC Med Inform Decis Mak Research BACKGROUND: In developing countries where both high rates of smoking and endemic tuberculosis (TB) are often present, identification of early lung cancer can be significantly confounded by the presence of nodules such as those due to latent TB (LTB). It is very challenging to distinguish lung cancer and LTB without invasive procedures, which have their own risks of morbidity and even mortality. METHODS: Our method uses a customized VGG16-based 15-layer 2-dimensional deep convolutional neural network (DNN) architecture with transfer learning. The DNN was trained and tested on sets of CT images set extracted from the National Lung Screening Trial and the National Institute of Allergy and Infectious Disease TB Portals. Performance of the DNN was evaluated under locked and step-wise unlocked pretrained weight conditions. RESULTS: The DNN with unlocked pretrained weights achieved an accuracy of 90.4% with an F score of 90.1%. CONCLUSIONS: Our findings support the potential for a DNN to serve as a noninvasive screening tool capable of reliably detecting and distinguishing between lung cancer and LTB. BioMed Central 2022-06-21 /pmc/articles/PMC9210663/ /pubmed/35725445 http://dx.doi.org/10.1186/s12911-022-01904-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Tan, Heng
Bates, Jason H. T.
Matthew Kinsey, C.
Discriminating TB lung nodules from early lung cancers using deep learning
title Discriminating TB lung nodules from early lung cancers using deep learning
title_full Discriminating TB lung nodules from early lung cancers using deep learning
title_fullStr Discriminating TB lung nodules from early lung cancers using deep learning
title_full_unstemmed Discriminating TB lung nodules from early lung cancers using deep learning
title_short Discriminating TB lung nodules from early lung cancers using deep learning
title_sort discriminating tb lung nodules from early lung cancers using deep learning
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9210663/
https://www.ncbi.nlm.nih.gov/pubmed/35725445
http://dx.doi.org/10.1186/s12911-022-01904-8
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