Cargando…
A Comprehensive Analysis of HAVCR1 as a Prognostic and Diagnostic Marker for Pan-Cancer
Hepatitis A virus cellular receptor (HAVCR1) is a type-1 integral membrane glycoprotein that plays a key role in immunity and renal regeneration and is abnormally expressed in various tumor types. Nonetheless, the function of HAVCR1 in pan-cancer remains unknown. In this study, we comprehensively an...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9213751/ https://www.ncbi.nlm.nih.gov/pubmed/35754803 http://dx.doi.org/10.3389/fgene.2022.904114 |
_version_ | 1784730906046496768 |
---|---|
author | Liu, Sheng Tang, Wenting Cao, Jing Shang, Mei Sun, Hengchang Gong, Jiao Hu, Bo |
author_facet | Liu, Sheng Tang, Wenting Cao, Jing Shang, Mei Sun, Hengchang Gong, Jiao Hu, Bo |
author_sort | Liu, Sheng |
collection | PubMed |
description | Hepatitis A virus cellular receptor (HAVCR1) is a type-1 integral membrane glycoprotein that plays a key role in immunity and renal regeneration and is abnormally expressed in various tumor types. Nonetheless, the function of HAVCR1 in pan-cancer remains unknown. In this study, we comprehensively analyzed the expression and promoter methylation level of HAVCR1 and assessed the immune cell infiltration, correlation between stromal and immune cell admixture, CD (Cluster of Differentiation) and HAVCR1 expression and prognostic value of HAVCR1 mRNA expression in Liver hepatocellular carcinoma (LIHC) and Pancreatic adenocarcinoma (PAAD). Our results showed that HAVCR1 was overexpressed while the promoter methylation of HAVCR1 was decreased in Liver hepatocellular carcinoma and Pancreatic adenocarcinoma. HAVCR1 was associated with increased infiltration of B cells, CD8 cells, macrophages, neutrophils and Dendritic cells in Liver hepatocellular carcinoma and Pancreatic adenocarcinoma. HAVCR1 expression was positively correlated with the immune, stromal and estimate scores of Pancreatic adenocarcinoma and the stromal and estimate scores of Liver hepatocellular carcinoma. Furthermore, HAVCR1 expression was correlated with other immune molecules such as HHLA2 (Human endogenous retrovirus-H long terminal repeat-associating protein 2), CD44 and TNFRSF4 (TNF Receptor Superfamily Member 4) in Liver hepatocellular carcinoma and Pancreatic adenocarcinoma. During Kaplan-Meier analysis, high HAVCR1 expression in Liver hepatocellular carcinoma and Pancreatic adenocarcinoma correlated with poor survival. A marginally significant p-value (p = 0.051) was obtained when the relationship between HAVCR1 expression in Liver hepatocellular carcinoma and prognosis was analyzed, attributed to the small sample size. Overall, we provided compelling evidence that HAVCR1 could be a prognostic and diagnostic marker for Liver hepatocellular carcinoma and Pancreatic adenocarcinoma. |
format | Online Article Text |
id | pubmed-9213751 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92137512022-06-23 A Comprehensive Analysis of HAVCR1 as a Prognostic and Diagnostic Marker for Pan-Cancer Liu, Sheng Tang, Wenting Cao, Jing Shang, Mei Sun, Hengchang Gong, Jiao Hu, Bo Front Genet Genetics Hepatitis A virus cellular receptor (HAVCR1) is a type-1 integral membrane glycoprotein that plays a key role in immunity and renal regeneration and is abnormally expressed in various tumor types. Nonetheless, the function of HAVCR1 in pan-cancer remains unknown. In this study, we comprehensively analyzed the expression and promoter methylation level of HAVCR1 and assessed the immune cell infiltration, correlation between stromal and immune cell admixture, CD (Cluster of Differentiation) and HAVCR1 expression and prognostic value of HAVCR1 mRNA expression in Liver hepatocellular carcinoma (LIHC) and Pancreatic adenocarcinoma (PAAD). Our results showed that HAVCR1 was overexpressed while the promoter methylation of HAVCR1 was decreased in Liver hepatocellular carcinoma and Pancreatic adenocarcinoma. HAVCR1 was associated with increased infiltration of B cells, CD8 cells, macrophages, neutrophils and Dendritic cells in Liver hepatocellular carcinoma and Pancreatic adenocarcinoma. HAVCR1 expression was positively correlated with the immune, stromal and estimate scores of Pancreatic adenocarcinoma and the stromal and estimate scores of Liver hepatocellular carcinoma. Furthermore, HAVCR1 expression was correlated with other immune molecules such as HHLA2 (Human endogenous retrovirus-H long terminal repeat-associating protein 2), CD44 and TNFRSF4 (TNF Receptor Superfamily Member 4) in Liver hepatocellular carcinoma and Pancreatic adenocarcinoma. During Kaplan-Meier analysis, high HAVCR1 expression in Liver hepatocellular carcinoma and Pancreatic adenocarcinoma correlated with poor survival. A marginally significant p-value (p = 0.051) was obtained when the relationship between HAVCR1 expression in Liver hepatocellular carcinoma and prognosis was analyzed, attributed to the small sample size. Overall, we provided compelling evidence that HAVCR1 could be a prognostic and diagnostic marker for Liver hepatocellular carcinoma and Pancreatic adenocarcinoma. Frontiers Media S.A. 2022-06-08 /pmc/articles/PMC9213751/ /pubmed/35754803 http://dx.doi.org/10.3389/fgene.2022.904114 Text en Copyright © 2022 Liu, Tang, Cao, Shang, Sun, Gong and Hu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Liu, Sheng Tang, Wenting Cao, Jing Shang, Mei Sun, Hengchang Gong, Jiao Hu, Bo A Comprehensive Analysis of HAVCR1 as a Prognostic and Diagnostic Marker for Pan-Cancer |
title | A Comprehensive Analysis of HAVCR1 as a Prognostic and Diagnostic Marker for Pan-Cancer |
title_full | A Comprehensive Analysis of HAVCR1 as a Prognostic and Diagnostic Marker for Pan-Cancer |
title_fullStr | A Comprehensive Analysis of HAVCR1 as a Prognostic and Diagnostic Marker for Pan-Cancer |
title_full_unstemmed | A Comprehensive Analysis of HAVCR1 as a Prognostic and Diagnostic Marker for Pan-Cancer |
title_short | A Comprehensive Analysis of HAVCR1 as a Prognostic and Diagnostic Marker for Pan-Cancer |
title_sort | comprehensive analysis of havcr1 as a prognostic and diagnostic marker for pan-cancer |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9213751/ https://www.ncbi.nlm.nih.gov/pubmed/35754803 http://dx.doi.org/10.3389/fgene.2022.904114 |
work_keys_str_mv | AT liusheng acomprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer AT tangwenting acomprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer AT caojing acomprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer AT shangmei acomprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer AT sunhengchang acomprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer AT gongjiao acomprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer AT hubo acomprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer AT liusheng comprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer AT tangwenting comprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer AT caojing comprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer AT shangmei comprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer AT sunhengchang comprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer AT gongjiao comprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer AT hubo comprehensiveanalysisofhavcr1asaprognosticanddiagnosticmarkerforpancancer |