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Harnessing interpretable and unsupervised machine learning to address big data from modern X-ray diffraction

The information content of crystalline materials becomes astronomical when collective electronic behavior and their fluctuations are taken into account. In the past decade, improvements in source brightness and detector technology at modern X-ray facilities have allowed a dramatically increased frac...

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Autores principales: Venderley, Jordan, Mallayya, Krishnanand, Matty, Michael, Krogstad, Matthew, Ruff, Jacob, Pleiss, Geoff, Kishore, Varsha, Mandrus, David, Phelan, Daniel, Poudel, Lekhanath, Wilson, Andrew Gordon, Weinberger, Kilian, Upreti, Puspa, Norman, Michael, Rosenkranz, Stephan, Osborn, Raymond, Kim, Eun-Ah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9214512/
https://www.ncbi.nlm.nih.gov/pubmed/35679347
http://dx.doi.org/10.1073/pnas.2109665119
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author Venderley, Jordan
Mallayya, Krishnanand
Matty, Michael
Krogstad, Matthew
Ruff, Jacob
Pleiss, Geoff
Kishore, Varsha
Mandrus, David
Phelan, Daniel
Poudel, Lekhanath
Wilson, Andrew Gordon
Weinberger, Kilian
Upreti, Puspa
Norman, Michael
Rosenkranz, Stephan
Osborn, Raymond
Kim, Eun-Ah
author_facet Venderley, Jordan
Mallayya, Krishnanand
Matty, Michael
Krogstad, Matthew
Ruff, Jacob
Pleiss, Geoff
Kishore, Varsha
Mandrus, David
Phelan, Daniel
Poudel, Lekhanath
Wilson, Andrew Gordon
Weinberger, Kilian
Upreti, Puspa
Norman, Michael
Rosenkranz, Stephan
Osborn, Raymond
Kim, Eun-Ah
author_sort Venderley, Jordan
collection PubMed
description The information content of crystalline materials becomes astronomical when collective electronic behavior and their fluctuations are taken into account. In the past decade, improvements in source brightness and detector technology at modern X-ray facilities have allowed a dramatically increased fraction of this information to be captured. Now, the primary challenge is to understand and discover scientific principles from big datasets when a comprehensive analysis is beyond human reach. We report the development of an unsupervised machine learning approach, X-ray diffraction (XRD) temperature clustering (X-TEC), that can automatically extract charge density wave order parameters and detect intraunit cell ordering and its fluctuations from a series of high-volume X-ray diffraction measurements taken at multiple temperatures. We benchmark X-TEC with diffraction data on a quasi-skutterudite family of materials, (Ca(x)Sr [Formula: see text])(3)Rh(4)Sn(13), where a quantum critical point is observed as a function of Ca concentration. We apply X-TEC to XRD data on the pyrochlore metal, Cd(2)Re(2)O(7), to investigate its two much-debated structural phase transitions and uncover the Goldstone mode accompanying them. We demonstrate how unprecedented atomic-scale knowledge can be gained when human researchers connect the X-TEC results to physical principles. Specifically, we extract from the X-TEC–revealed selection rules that the Cd and Re displacements are approximately equal in amplitude but out of phase. This discovery reveals a previously unknown involvement of [Formula: see text] Re, supporting the idea of an electronic origin to the structural order. Our approach can radically transform XRD experiments by allowing in operando data analysis and enabling researchers to refine experiments by discovering interesting regions of phase space on the fly.
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spelling pubmed-92145122022-06-23 Harnessing interpretable and unsupervised machine learning to address big data from modern X-ray diffraction Venderley, Jordan Mallayya, Krishnanand Matty, Michael Krogstad, Matthew Ruff, Jacob Pleiss, Geoff Kishore, Varsha Mandrus, David Phelan, Daniel Poudel, Lekhanath Wilson, Andrew Gordon Weinberger, Kilian Upreti, Puspa Norman, Michael Rosenkranz, Stephan Osborn, Raymond Kim, Eun-Ah Proc Natl Acad Sci U S A Physical Sciences The information content of crystalline materials becomes astronomical when collective electronic behavior and their fluctuations are taken into account. In the past decade, improvements in source brightness and detector technology at modern X-ray facilities have allowed a dramatically increased fraction of this information to be captured. Now, the primary challenge is to understand and discover scientific principles from big datasets when a comprehensive analysis is beyond human reach. We report the development of an unsupervised machine learning approach, X-ray diffraction (XRD) temperature clustering (X-TEC), that can automatically extract charge density wave order parameters and detect intraunit cell ordering and its fluctuations from a series of high-volume X-ray diffraction measurements taken at multiple temperatures. We benchmark X-TEC with diffraction data on a quasi-skutterudite family of materials, (Ca(x)Sr [Formula: see text])(3)Rh(4)Sn(13), where a quantum critical point is observed as a function of Ca concentration. We apply X-TEC to XRD data on the pyrochlore metal, Cd(2)Re(2)O(7), to investigate its two much-debated structural phase transitions and uncover the Goldstone mode accompanying them. We demonstrate how unprecedented atomic-scale knowledge can be gained when human researchers connect the X-TEC results to physical principles. Specifically, we extract from the X-TEC–revealed selection rules that the Cd and Re displacements are approximately equal in amplitude but out of phase. This discovery reveals a previously unknown involvement of [Formula: see text] Re, supporting the idea of an electronic origin to the structural order. Our approach can radically transform XRD experiments by allowing in operando data analysis and enabling researchers to refine experiments by discovering interesting regions of phase space on the fly. National Academy of Sciences 2022-06-09 2022-06-14 /pmc/articles/PMC9214512/ /pubmed/35679347 http://dx.doi.org/10.1073/pnas.2109665119 Text en Copyright © 2022 the Author(s). Published by PNAS https://creativecommons.org/licenses/by/4.0/This open access article is distributed under Creative Commons Attribution License 4.0 (CC BY) (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Physical Sciences
Venderley, Jordan
Mallayya, Krishnanand
Matty, Michael
Krogstad, Matthew
Ruff, Jacob
Pleiss, Geoff
Kishore, Varsha
Mandrus, David
Phelan, Daniel
Poudel, Lekhanath
Wilson, Andrew Gordon
Weinberger, Kilian
Upreti, Puspa
Norman, Michael
Rosenkranz, Stephan
Osborn, Raymond
Kim, Eun-Ah
Harnessing interpretable and unsupervised machine learning to address big data from modern X-ray diffraction
title Harnessing interpretable and unsupervised machine learning to address big data from modern X-ray diffraction
title_full Harnessing interpretable and unsupervised machine learning to address big data from modern X-ray diffraction
title_fullStr Harnessing interpretable and unsupervised machine learning to address big data from modern X-ray diffraction
title_full_unstemmed Harnessing interpretable and unsupervised machine learning to address big data from modern X-ray diffraction
title_short Harnessing interpretable and unsupervised machine learning to address big data from modern X-ray diffraction
title_sort harnessing interpretable and unsupervised machine learning to address big data from modern x-ray diffraction
topic Physical Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9214512/
https://www.ncbi.nlm.nih.gov/pubmed/35679347
http://dx.doi.org/10.1073/pnas.2109665119
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