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Target-induced activation of DNAzyme for highly sensitive colorimetric detection of bleomycin via DNA scission

In this work, a label-free and sensitive colorimetric sensing strategy for the detection of bleomycin (BLM) was developed on the basis of BLM-mediated activation of G-quadruplex DNAzyme via DNA strand scission. A G-quadruplex based hairpin probe (G4HP) containing the scission site (5′-GT-3′) of BLM...

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Autores principales: Liao, Xiaofei, Li, Mengyan, Zou, Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9215162/
https://www.ncbi.nlm.nih.gov/pubmed/35799941
http://dx.doi.org/10.1039/d2ra02816f
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author Liao, Xiaofei
Li, Mengyan
Zou, Li
author_facet Liao, Xiaofei
Li, Mengyan
Zou, Li
author_sort Liao, Xiaofei
collection PubMed
description In this work, a label-free and sensitive colorimetric sensing strategy for the detection of bleomycin (BLM) was developed on the basis of BLM-mediated activation of G-quadruplex DNAzyme via DNA strand scission. A G-quadruplex based hairpin probe (G4HP) containing the scission site (5′-GT-3′) of BLM at the loop region and guanine (G)-rich sequences at its 5′-end was employed in this protocol. In the presence of BLM, it may cleave the 5′-GT-3′ site of the hairpin probe with Fe(ii) as a cofactor, releasing the G-tetrads DNA fragment, which may further bind hemin to form a catalytic G-quadruplex-hemin DNAzyme. The resultant G-quadruplex DNAzyme has notable peroxidase-like activity, which effectively catalyzes the oxidation of 2,2′-azino-bis(3-ethylbenzothiozoline-6-sulfonic acid) (ABTS) by H(2)O(2) to produce the blue-green-colored free-radical cation (ABTS(·+)). Therefore, the detection of BLM can be achieved by observing the color transition with the naked eye or measuring the absorbance at a wavelength of 420 nm using a UV-Vis spectrophotometer. Attributing to the specific BLM-induced DNA strand scission and the effective locking of G-tetrads in the stem of the G4HP, the colorimetric sensing strategy exhibits high sensitivity and selectivity for detection of BLM in human serum samples, which might hold great promise for BLM assay in biomedical and clinical research.
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spelling pubmed-92151622022-07-06 Target-induced activation of DNAzyme for highly sensitive colorimetric detection of bleomycin via DNA scission Liao, Xiaofei Li, Mengyan Zou, Li RSC Adv Chemistry In this work, a label-free and sensitive colorimetric sensing strategy for the detection of bleomycin (BLM) was developed on the basis of BLM-mediated activation of G-quadruplex DNAzyme via DNA strand scission. A G-quadruplex based hairpin probe (G4HP) containing the scission site (5′-GT-3′) of BLM at the loop region and guanine (G)-rich sequences at its 5′-end was employed in this protocol. In the presence of BLM, it may cleave the 5′-GT-3′ site of the hairpin probe with Fe(ii) as a cofactor, releasing the G-tetrads DNA fragment, which may further bind hemin to form a catalytic G-quadruplex-hemin DNAzyme. The resultant G-quadruplex DNAzyme has notable peroxidase-like activity, which effectively catalyzes the oxidation of 2,2′-azino-bis(3-ethylbenzothiozoline-6-sulfonic acid) (ABTS) by H(2)O(2) to produce the blue-green-colored free-radical cation (ABTS(·+)). Therefore, the detection of BLM can be achieved by observing the color transition with the naked eye or measuring the absorbance at a wavelength of 420 nm using a UV-Vis spectrophotometer. Attributing to the specific BLM-induced DNA strand scission and the effective locking of G-tetrads in the stem of the G4HP, the colorimetric sensing strategy exhibits high sensitivity and selectivity for detection of BLM in human serum samples, which might hold great promise for BLM assay in biomedical and clinical research. The Royal Society of Chemistry 2022-06-22 /pmc/articles/PMC9215162/ /pubmed/35799941 http://dx.doi.org/10.1039/d2ra02816f Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Liao, Xiaofei
Li, Mengyan
Zou, Li
Target-induced activation of DNAzyme for highly sensitive colorimetric detection of bleomycin via DNA scission
title Target-induced activation of DNAzyme for highly sensitive colorimetric detection of bleomycin via DNA scission
title_full Target-induced activation of DNAzyme for highly sensitive colorimetric detection of bleomycin via DNA scission
title_fullStr Target-induced activation of DNAzyme for highly sensitive colorimetric detection of bleomycin via DNA scission
title_full_unstemmed Target-induced activation of DNAzyme for highly sensitive colorimetric detection of bleomycin via DNA scission
title_short Target-induced activation of DNAzyme for highly sensitive colorimetric detection of bleomycin via DNA scission
title_sort target-induced activation of dnazyme for highly sensitive colorimetric detection of bleomycin via dna scission
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9215162/
https://www.ncbi.nlm.nih.gov/pubmed/35799941
http://dx.doi.org/10.1039/d2ra02816f
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AT limengyan targetinducedactivationofdnazymeforhighlysensitivecolorimetricdetectionofbleomycinviadnascission
AT zouli targetinducedactivationofdnazymeforhighlysensitivecolorimetricdetectionofbleomycinviadnascission