Cargando…
Human Angiotensin I-Converting Enzyme Produced by Different Cells: Classification of the SERS Spectra with Linear Discriminant Analysis
Angiotensin I-converting enzyme (ACE) is a peptidase widely presented in human tissues and biological fluids. ACE is a glycoprotein containing 17 potential N-glycosylation sites which can be glycosylated in different ways due to post-translational modification of the protein in different cells. For...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9219671/ https://www.ncbi.nlm.nih.gov/pubmed/35740411 http://dx.doi.org/10.3390/biomedicines10061389 |
_version_ | 1784732171052777472 |
---|---|
author | Boginskaya, Irina Safiullin, Robert Tikhomirova, Victoria Kryukova, Olga Nechaeva, Natalia Bulaeva, Naida Golukhova, Elena Ryzhikov, Ilya Kost, Olga Afanasev, Konstantin Kurochkin, Ilya |
author_facet | Boginskaya, Irina Safiullin, Robert Tikhomirova, Victoria Kryukova, Olga Nechaeva, Natalia Bulaeva, Naida Golukhova, Elena Ryzhikov, Ilya Kost, Olga Afanasev, Konstantin Kurochkin, Ilya |
author_sort | Boginskaya, Irina |
collection | PubMed |
description | Angiotensin I-converting enzyme (ACE) is a peptidase widely presented in human tissues and biological fluids. ACE is a glycoprotein containing 17 potential N-glycosylation sites which can be glycosylated in different ways due to post-translational modification of the protein in different cells. For the first time, surface-enhanced Raman scattering (SERS) spectra of human ACE from lungs, mainly produced by endothelial cells, ACE from heart, produced by endothelial heart cells and miofibroblasts, and ACE from seminal fluid, produced by epithelial cells, have been compared with full assignment. The ability to separate ACEs’ SERS spectra was demonstrated using the linear discriminant analysis (LDA) method with high accuracy. The intervals in the spectra with maximum contributions of the spectral features were determined and their contribution to the spectrum of each separate ACE was evaluated. Near 25 spectral features forming three intervals were enough for successful separation of the spectra of different ACEs. However, more spectral information could be obtained from analysis of 50 spectral features. Band assignment showed that several features did not correlate with band assignments to amino acids or peptides, which indicated the carbohydrate contribution to the final spectra. Analysis of SERS spectra could be beneficial for the detection of tissue-specific ACEs. |
format | Online Article Text |
id | pubmed-9219671 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-92196712022-06-24 Human Angiotensin I-Converting Enzyme Produced by Different Cells: Classification of the SERS Spectra with Linear Discriminant Analysis Boginskaya, Irina Safiullin, Robert Tikhomirova, Victoria Kryukova, Olga Nechaeva, Natalia Bulaeva, Naida Golukhova, Elena Ryzhikov, Ilya Kost, Olga Afanasev, Konstantin Kurochkin, Ilya Biomedicines Article Angiotensin I-converting enzyme (ACE) is a peptidase widely presented in human tissues and biological fluids. ACE is a glycoprotein containing 17 potential N-glycosylation sites which can be glycosylated in different ways due to post-translational modification of the protein in different cells. For the first time, surface-enhanced Raman scattering (SERS) spectra of human ACE from lungs, mainly produced by endothelial cells, ACE from heart, produced by endothelial heart cells and miofibroblasts, and ACE from seminal fluid, produced by epithelial cells, have been compared with full assignment. The ability to separate ACEs’ SERS spectra was demonstrated using the linear discriminant analysis (LDA) method with high accuracy. The intervals in the spectra with maximum contributions of the spectral features were determined and their contribution to the spectrum of each separate ACE was evaluated. Near 25 spectral features forming three intervals were enough for successful separation of the spectra of different ACEs. However, more spectral information could be obtained from analysis of 50 spectral features. Band assignment showed that several features did not correlate with band assignments to amino acids or peptides, which indicated the carbohydrate contribution to the final spectra. Analysis of SERS spectra could be beneficial for the detection of tissue-specific ACEs. MDPI 2022-06-12 /pmc/articles/PMC9219671/ /pubmed/35740411 http://dx.doi.org/10.3390/biomedicines10061389 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Boginskaya, Irina Safiullin, Robert Tikhomirova, Victoria Kryukova, Olga Nechaeva, Natalia Bulaeva, Naida Golukhova, Elena Ryzhikov, Ilya Kost, Olga Afanasev, Konstantin Kurochkin, Ilya Human Angiotensin I-Converting Enzyme Produced by Different Cells: Classification of the SERS Spectra with Linear Discriminant Analysis |
title | Human Angiotensin I-Converting Enzyme Produced by Different Cells: Classification of the SERS Spectra with Linear Discriminant Analysis |
title_full | Human Angiotensin I-Converting Enzyme Produced by Different Cells: Classification of the SERS Spectra with Linear Discriminant Analysis |
title_fullStr | Human Angiotensin I-Converting Enzyme Produced by Different Cells: Classification of the SERS Spectra with Linear Discriminant Analysis |
title_full_unstemmed | Human Angiotensin I-Converting Enzyme Produced by Different Cells: Classification of the SERS Spectra with Linear Discriminant Analysis |
title_short | Human Angiotensin I-Converting Enzyme Produced by Different Cells: Classification of the SERS Spectra with Linear Discriminant Analysis |
title_sort | human angiotensin i-converting enzyme produced by different cells: classification of the sers spectra with linear discriminant analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9219671/ https://www.ncbi.nlm.nih.gov/pubmed/35740411 http://dx.doi.org/10.3390/biomedicines10061389 |
work_keys_str_mv | AT boginskayairina humanangiotensiniconvertingenzymeproducedbydifferentcellsclassificationofthesersspectrawithlineardiscriminantanalysis AT safiullinrobert humanangiotensiniconvertingenzymeproducedbydifferentcellsclassificationofthesersspectrawithlineardiscriminantanalysis AT tikhomirovavictoria humanangiotensiniconvertingenzymeproducedbydifferentcellsclassificationofthesersspectrawithlineardiscriminantanalysis AT kryukovaolga humanangiotensiniconvertingenzymeproducedbydifferentcellsclassificationofthesersspectrawithlineardiscriminantanalysis AT nechaevanatalia humanangiotensiniconvertingenzymeproducedbydifferentcellsclassificationofthesersspectrawithlineardiscriminantanalysis AT bulaevanaida humanangiotensiniconvertingenzymeproducedbydifferentcellsclassificationofthesersspectrawithlineardiscriminantanalysis AT golukhovaelena humanangiotensiniconvertingenzymeproducedbydifferentcellsclassificationofthesersspectrawithlineardiscriminantanalysis AT ryzhikovilya humanangiotensiniconvertingenzymeproducedbydifferentcellsclassificationofthesersspectrawithlineardiscriminantanalysis AT kostolga humanangiotensiniconvertingenzymeproducedbydifferentcellsclassificationofthesersspectrawithlineardiscriminantanalysis AT afanasevkonstantin humanangiotensiniconvertingenzymeproducedbydifferentcellsclassificationofthesersspectrawithlineardiscriminantanalysis AT kurochkinilya humanangiotensiniconvertingenzymeproducedbydifferentcellsclassificationofthesersspectrawithlineardiscriminantanalysis |