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BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images

Breast cancer is one of the most common types of cancer and is the leading cause of cancer-related death. Diagnosis of breast cancer is based on the evaluation of pathology slides. In the era of digital pathology, these slides can be converted into digital whole slide images (WSIs) for further analy...

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Autores principales: Huang, Jin, Mei, Liye, Long, Mengping, Liu, Yiqiang, Sun, Wei, Li, Xiaoxiao, Shen, Hui, Zhou, Fuling, Ruan, Xiaolan, Wang, Du, Wang, Shu, Hu, Taobo, Lei, Cheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9220285/
https://www.ncbi.nlm.nih.gov/pubmed/35735504
http://dx.doi.org/10.3390/bioengineering9060261
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author Huang, Jin
Mei, Liye
Long, Mengping
Liu, Yiqiang
Sun, Wei
Li, Xiaoxiao
Shen, Hui
Zhou, Fuling
Ruan, Xiaolan
Wang, Du
Wang, Shu
Hu, Taobo
Lei, Cheng
author_facet Huang, Jin
Mei, Liye
Long, Mengping
Liu, Yiqiang
Sun, Wei
Li, Xiaoxiao
Shen, Hui
Zhou, Fuling
Ruan, Xiaolan
Wang, Du
Wang, Shu
Hu, Taobo
Lei, Cheng
author_sort Huang, Jin
collection PubMed
description Breast cancer is one of the most common types of cancer and is the leading cause of cancer-related death. Diagnosis of breast cancer is based on the evaluation of pathology slides. In the era of digital pathology, these slides can be converted into digital whole slide images (WSIs) for further analysis. However, due to their sheer size, digital WSIs diagnoses are time consuming and challenging. In this study, we present a lightweight architecture that consists of a bilinear structure and MobileNet-V3 network, bilinear MobileNet-V3 (BM-Net), to analyze breast cancer WSIs. We utilized the WSI dataset from the ICIAR2018 Grand Challenge on Breast Cancer Histology Images (BACH) competition, which contains four classes: normal, benign, in situ carcinoma, and invasive carcinoma. We adopted data augmentation techniques to increase diversity and utilized focal loss to remove class imbalance. We achieved high performance, with 0.88 accuracy in patch classification and an average 0.71 score, which surpassed state-of-the-art models. Our BM-Net shows great potential in detecting cancer in WSIs and is a promising clinical tool.
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spelling pubmed-92202852022-06-24 BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images Huang, Jin Mei, Liye Long, Mengping Liu, Yiqiang Sun, Wei Li, Xiaoxiao Shen, Hui Zhou, Fuling Ruan, Xiaolan Wang, Du Wang, Shu Hu, Taobo Lei, Cheng Bioengineering (Basel) Article Breast cancer is one of the most common types of cancer and is the leading cause of cancer-related death. Diagnosis of breast cancer is based on the evaluation of pathology slides. In the era of digital pathology, these slides can be converted into digital whole slide images (WSIs) for further analysis. However, due to their sheer size, digital WSIs diagnoses are time consuming and challenging. In this study, we present a lightweight architecture that consists of a bilinear structure and MobileNet-V3 network, bilinear MobileNet-V3 (BM-Net), to analyze breast cancer WSIs. We utilized the WSI dataset from the ICIAR2018 Grand Challenge on Breast Cancer Histology Images (BACH) competition, which contains four classes: normal, benign, in situ carcinoma, and invasive carcinoma. We adopted data augmentation techniques to increase diversity and utilized focal loss to remove class imbalance. We achieved high performance, with 0.88 accuracy in patch classification and an average 0.71 score, which surpassed state-of-the-art models. Our BM-Net shows great potential in detecting cancer in WSIs and is a promising clinical tool. MDPI 2022-06-20 /pmc/articles/PMC9220285/ /pubmed/35735504 http://dx.doi.org/10.3390/bioengineering9060261 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Huang, Jin
Mei, Liye
Long, Mengping
Liu, Yiqiang
Sun, Wei
Li, Xiaoxiao
Shen, Hui
Zhou, Fuling
Ruan, Xiaolan
Wang, Du
Wang, Shu
Hu, Taobo
Lei, Cheng
BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images
title BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images
title_full BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images
title_fullStr BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images
title_full_unstemmed BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images
title_short BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images
title_sort bm-net: cnn-based mobilenet-v3 and bilinear structure for breast cancer detection in whole slide images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9220285/
https://www.ncbi.nlm.nih.gov/pubmed/35735504
http://dx.doi.org/10.3390/bioengineering9060261
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