Cargando…
BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images
Breast cancer is one of the most common types of cancer and is the leading cause of cancer-related death. Diagnosis of breast cancer is based on the evaluation of pathology slides. In the era of digital pathology, these slides can be converted into digital whole slide images (WSIs) for further analy...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9220285/ https://www.ncbi.nlm.nih.gov/pubmed/35735504 http://dx.doi.org/10.3390/bioengineering9060261 |
_version_ | 1784732335758901248 |
---|---|
author | Huang, Jin Mei, Liye Long, Mengping Liu, Yiqiang Sun, Wei Li, Xiaoxiao Shen, Hui Zhou, Fuling Ruan, Xiaolan Wang, Du Wang, Shu Hu, Taobo Lei, Cheng |
author_facet | Huang, Jin Mei, Liye Long, Mengping Liu, Yiqiang Sun, Wei Li, Xiaoxiao Shen, Hui Zhou, Fuling Ruan, Xiaolan Wang, Du Wang, Shu Hu, Taobo Lei, Cheng |
author_sort | Huang, Jin |
collection | PubMed |
description | Breast cancer is one of the most common types of cancer and is the leading cause of cancer-related death. Diagnosis of breast cancer is based on the evaluation of pathology slides. In the era of digital pathology, these slides can be converted into digital whole slide images (WSIs) for further analysis. However, due to their sheer size, digital WSIs diagnoses are time consuming and challenging. In this study, we present a lightweight architecture that consists of a bilinear structure and MobileNet-V3 network, bilinear MobileNet-V3 (BM-Net), to analyze breast cancer WSIs. We utilized the WSI dataset from the ICIAR2018 Grand Challenge on Breast Cancer Histology Images (BACH) competition, which contains four classes: normal, benign, in situ carcinoma, and invasive carcinoma. We adopted data augmentation techniques to increase diversity and utilized focal loss to remove class imbalance. We achieved high performance, with 0.88 accuracy in patch classification and an average 0.71 score, which surpassed state-of-the-art models. Our BM-Net shows great potential in detecting cancer in WSIs and is a promising clinical tool. |
format | Online Article Text |
id | pubmed-9220285 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-92202852022-06-24 BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images Huang, Jin Mei, Liye Long, Mengping Liu, Yiqiang Sun, Wei Li, Xiaoxiao Shen, Hui Zhou, Fuling Ruan, Xiaolan Wang, Du Wang, Shu Hu, Taobo Lei, Cheng Bioengineering (Basel) Article Breast cancer is one of the most common types of cancer and is the leading cause of cancer-related death. Diagnosis of breast cancer is based on the evaluation of pathology slides. In the era of digital pathology, these slides can be converted into digital whole slide images (WSIs) for further analysis. However, due to their sheer size, digital WSIs diagnoses are time consuming and challenging. In this study, we present a lightweight architecture that consists of a bilinear structure and MobileNet-V3 network, bilinear MobileNet-V3 (BM-Net), to analyze breast cancer WSIs. We utilized the WSI dataset from the ICIAR2018 Grand Challenge on Breast Cancer Histology Images (BACH) competition, which contains four classes: normal, benign, in situ carcinoma, and invasive carcinoma. We adopted data augmentation techniques to increase diversity and utilized focal loss to remove class imbalance. We achieved high performance, with 0.88 accuracy in patch classification and an average 0.71 score, which surpassed state-of-the-art models. Our BM-Net shows great potential in detecting cancer in WSIs and is a promising clinical tool. MDPI 2022-06-20 /pmc/articles/PMC9220285/ /pubmed/35735504 http://dx.doi.org/10.3390/bioengineering9060261 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Huang, Jin Mei, Liye Long, Mengping Liu, Yiqiang Sun, Wei Li, Xiaoxiao Shen, Hui Zhou, Fuling Ruan, Xiaolan Wang, Du Wang, Shu Hu, Taobo Lei, Cheng BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images |
title | BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images |
title_full | BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images |
title_fullStr | BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images |
title_full_unstemmed | BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images |
title_short | BM-Net: CNN-Based MobileNet-V3 and Bilinear Structure for Breast Cancer Detection in Whole Slide Images |
title_sort | bm-net: cnn-based mobilenet-v3 and bilinear structure for breast cancer detection in whole slide images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9220285/ https://www.ncbi.nlm.nih.gov/pubmed/35735504 http://dx.doi.org/10.3390/bioengineering9060261 |
work_keys_str_mv | AT huangjin bmnetcnnbasedmobilenetv3andbilinearstructureforbreastcancerdetectioninwholeslideimages AT meiliye bmnetcnnbasedmobilenetv3andbilinearstructureforbreastcancerdetectioninwholeslideimages AT longmengping bmnetcnnbasedmobilenetv3andbilinearstructureforbreastcancerdetectioninwholeslideimages AT liuyiqiang bmnetcnnbasedmobilenetv3andbilinearstructureforbreastcancerdetectioninwholeslideimages AT sunwei bmnetcnnbasedmobilenetv3andbilinearstructureforbreastcancerdetectioninwholeslideimages AT lixiaoxiao bmnetcnnbasedmobilenetv3andbilinearstructureforbreastcancerdetectioninwholeslideimages AT shenhui bmnetcnnbasedmobilenetv3andbilinearstructureforbreastcancerdetectioninwholeslideimages AT zhoufuling bmnetcnnbasedmobilenetv3andbilinearstructureforbreastcancerdetectioninwholeslideimages AT ruanxiaolan bmnetcnnbasedmobilenetv3andbilinearstructureforbreastcancerdetectioninwholeslideimages AT wangdu bmnetcnnbasedmobilenetv3andbilinearstructureforbreastcancerdetectioninwholeslideimages AT wangshu bmnetcnnbasedmobilenetv3andbilinearstructureforbreastcancerdetectioninwholeslideimages AT hutaobo bmnetcnnbasedmobilenetv3andbilinearstructureforbreastcancerdetectioninwholeslideimages AT leicheng bmnetcnnbasedmobilenetv3andbilinearstructureforbreastcancerdetectioninwholeslideimages |