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Application of human RNase P normalization for the realistic estimation of SARS-CoV-2 viral load in wastewater: A perspective from Qatar wastewater surveillance
The apparent uncertainty associated with shedding patterns, environmental impacts, and sample processing strategies have greatly influenced the variability of SARS-CoV-2 concentrations in wastewater. This study evaluates the use of a new normalization approach using human RNase P for the logic estim...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Author(s). Published by Elsevier B.V.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9220754/ https://www.ncbi.nlm.nih.gov/pubmed/35761926 http://dx.doi.org/10.1016/j.eti.2022.102775 |
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author | El-Malah, Shimaa S. Saththasivam, Jayaprakash Jabbar, Khadeeja Abdul K.K., Arun Gomez, Tricia A. Ahmed, Ayeda A. Mohamoud, Yasmin A. Malek, Joel A. Abu Raddad, Laith J. Abu Halaweh, Hussein A. Bertollini, Roberto Lawler, Jenny Mahmoud, Khaled A. |
author_facet | El-Malah, Shimaa S. Saththasivam, Jayaprakash Jabbar, Khadeeja Abdul K.K., Arun Gomez, Tricia A. Ahmed, Ayeda A. Mohamoud, Yasmin A. Malek, Joel A. Abu Raddad, Laith J. Abu Halaweh, Hussein A. Bertollini, Roberto Lawler, Jenny Mahmoud, Khaled A. |
author_sort | El-Malah, Shimaa S. |
collection | PubMed |
description | The apparent uncertainty associated with shedding patterns, environmental impacts, and sample processing strategies have greatly influenced the variability of SARS-CoV-2 concentrations in wastewater. This study evaluates the use of a new normalization approach using human RNase P for the logic estimation of SARS-CoV-2 viral load in wastewater. SARS-CoV-2 variants outbreak was monitored during the circulating wave between February and August 2021. Sewage samples were collected from five major wastewater treatment plants and subsequently analyzed to determine the viral loads in the wastewater. SARS-CoV-2 was detected in all the samples where the wastewater Ct values exhibited a similar trend as the reported number of new daily positive cases in the country. The infected population number was estimated using a mathematical model that compensated for RNA decay due to wastewater temperature and sewer residence time, and which indicated that the number of positive cases circulating in the population declined from 765,729 ± 142,080 to 2,303 ± 464 during the sampling period. Genomic analyses of SARS-CoV-2 of thirty wastewater samples collected between March 2021 and April 2021 revealed that alpha (B.1.1.7) and beta (B.1.351) were among the dominant variants of concern (VOC) in Qatar. The findings of this study imply that the normalization of data allows a more realistic assessment of incidence trends within the population. |
format | Online Article Text |
id | pubmed-9220754 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | The Author(s). Published by Elsevier B.V. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92207542022-06-23 Application of human RNase P normalization for the realistic estimation of SARS-CoV-2 viral load in wastewater: A perspective from Qatar wastewater surveillance El-Malah, Shimaa S. Saththasivam, Jayaprakash Jabbar, Khadeeja Abdul K.K., Arun Gomez, Tricia A. Ahmed, Ayeda A. Mohamoud, Yasmin A. Malek, Joel A. Abu Raddad, Laith J. Abu Halaweh, Hussein A. Bertollini, Roberto Lawler, Jenny Mahmoud, Khaled A. Environ Technol Innov Article The apparent uncertainty associated with shedding patterns, environmental impacts, and sample processing strategies have greatly influenced the variability of SARS-CoV-2 concentrations in wastewater. This study evaluates the use of a new normalization approach using human RNase P for the logic estimation of SARS-CoV-2 viral load in wastewater. SARS-CoV-2 variants outbreak was monitored during the circulating wave between February and August 2021. Sewage samples were collected from five major wastewater treatment plants and subsequently analyzed to determine the viral loads in the wastewater. SARS-CoV-2 was detected in all the samples where the wastewater Ct values exhibited a similar trend as the reported number of new daily positive cases in the country. The infected population number was estimated using a mathematical model that compensated for RNA decay due to wastewater temperature and sewer residence time, and which indicated that the number of positive cases circulating in the population declined from 765,729 ± 142,080 to 2,303 ± 464 during the sampling period. Genomic analyses of SARS-CoV-2 of thirty wastewater samples collected between March 2021 and April 2021 revealed that alpha (B.1.1.7) and beta (B.1.351) were among the dominant variants of concern (VOC) in Qatar. The findings of this study imply that the normalization of data allows a more realistic assessment of incidence trends within the population. The Author(s). Published by Elsevier B.V. 2022-08 2022-06-22 /pmc/articles/PMC9220754/ /pubmed/35761926 http://dx.doi.org/10.1016/j.eti.2022.102775 Text en © 2022 The Author(s) Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article El-Malah, Shimaa S. Saththasivam, Jayaprakash Jabbar, Khadeeja Abdul K.K., Arun Gomez, Tricia A. Ahmed, Ayeda A. Mohamoud, Yasmin A. Malek, Joel A. Abu Raddad, Laith J. Abu Halaweh, Hussein A. Bertollini, Roberto Lawler, Jenny Mahmoud, Khaled A. Application of human RNase P normalization for the realistic estimation of SARS-CoV-2 viral load in wastewater: A perspective from Qatar wastewater surveillance |
title | Application of human RNase P normalization for the realistic estimation of SARS-CoV-2 viral load in wastewater: A perspective from Qatar wastewater surveillance |
title_full | Application of human RNase P normalization for the realistic estimation of SARS-CoV-2 viral load in wastewater: A perspective from Qatar wastewater surveillance |
title_fullStr | Application of human RNase P normalization for the realistic estimation of SARS-CoV-2 viral load in wastewater: A perspective from Qatar wastewater surveillance |
title_full_unstemmed | Application of human RNase P normalization for the realistic estimation of SARS-CoV-2 viral load in wastewater: A perspective from Qatar wastewater surveillance |
title_short | Application of human RNase P normalization for the realistic estimation of SARS-CoV-2 viral load in wastewater: A perspective from Qatar wastewater surveillance |
title_sort | application of human rnase p normalization for the realistic estimation of sars-cov-2 viral load in wastewater: a perspective from qatar wastewater surveillance |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9220754/ https://www.ncbi.nlm.nih.gov/pubmed/35761926 http://dx.doi.org/10.1016/j.eti.2022.102775 |
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