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A Deep Modality-Specific Ensemble for Improving Pneumonia Detection in Chest X-rays

Pneumonia is an acute respiratory infectious disease caused by bacteria, fungi, or viruses. Fluid-filled lungs due to the disease result in painful breathing difficulties and reduced oxygen intake. Effective diagnosis is critical for appropriate and timely treatment and improving survival. Chest X-r...

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Autores principales: Rajaraman, Sivaramakrishnan, Guo, Peng, Xue, Zhiyun, Antani, Sameer K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9221627/
https://www.ncbi.nlm.nih.gov/pubmed/35741252
http://dx.doi.org/10.3390/diagnostics12061442
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author Rajaraman, Sivaramakrishnan
Guo, Peng
Xue, Zhiyun
Antani, Sameer K.
author_facet Rajaraman, Sivaramakrishnan
Guo, Peng
Xue, Zhiyun
Antani, Sameer K.
author_sort Rajaraman, Sivaramakrishnan
collection PubMed
description Pneumonia is an acute respiratory infectious disease caused by bacteria, fungi, or viruses. Fluid-filled lungs due to the disease result in painful breathing difficulties and reduced oxygen intake. Effective diagnosis is critical for appropriate and timely treatment and improving survival. Chest X-rays (CXRs) are routinely used to screen for the infection. Computer-aided detection methods using conventional deep learning (DL) models for identifying pneumonia-consistent manifestations in CXRs have demonstrated superiority over traditional machine learning approaches. However, their performance is still inadequate to aid in clinical decision-making. This study improves upon the state of the art as follows. Specifically, we train a DL classifier on large collections of CXR images to develop a CXR modality-specific model. Next, we use this model as the classifier backbone in the RetinaNet object detection network. We also initialize this backbone using random weights and ImageNet-pretrained weights. Finally, we construct an ensemble of the best-performing models resulting in improved detection of pneumonia-consistent findings. Experimental results demonstrate that an ensemble of the top-3 performing RetinaNet models outperformed individual models in terms of the mean average precision (mAP) metric (0.3272, 95% CI: (0.3006,0.3538)) toward this task, which is markedly higher than the state of the art (mAP: 0.2547). This performance improvement is attributed to the key modifications in initializing the weights of classifier backbones and constructing model ensembles to reduce prediction variance compared to individual constituent models.
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spelling pubmed-92216272022-06-24 A Deep Modality-Specific Ensemble for Improving Pneumonia Detection in Chest X-rays Rajaraman, Sivaramakrishnan Guo, Peng Xue, Zhiyun Antani, Sameer K. Diagnostics (Basel) Article Pneumonia is an acute respiratory infectious disease caused by bacteria, fungi, or viruses. Fluid-filled lungs due to the disease result in painful breathing difficulties and reduced oxygen intake. Effective diagnosis is critical for appropriate and timely treatment and improving survival. Chest X-rays (CXRs) are routinely used to screen for the infection. Computer-aided detection methods using conventional deep learning (DL) models for identifying pneumonia-consistent manifestations in CXRs have demonstrated superiority over traditional machine learning approaches. However, their performance is still inadequate to aid in clinical decision-making. This study improves upon the state of the art as follows. Specifically, we train a DL classifier on large collections of CXR images to develop a CXR modality-specific model. Next, we use this model as the classifier backbone in the RetinaNet object detection network. We also initialize this backbone using random weights and ImageNet-pretrained weights. Finally, we construct an ensemble of the best-performing models resulting in improved detection of pneumonia-consistent findings. Experimental results demonstrate that an ensemble of the top-3 performing RetinaNet models outperformed individual models in terms of the mean average precision (mAP) metric (0.3272, 95% CI: (0.3006,0.3538)) toward this task, which is markedly higher than the state of the art (mAP: 0.2547). This performance improvement is attributed to the key modifications in initializing the weights of classifier backbones and constructing model ensembles to reduce prediction variance compared to individual constituent models. MDPI 2022-06-11 /pmc/articles/PMC9221627/ /pubmed/35741252 http://dx.doi.org/10.3390/diagnostics12061442 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Rajaraman, Sivaramakrishnan
Guo, Peng
Xue, Zhiyun
Antani, Sameer K.
A Deep Modality-Specific Ensemble for Improving Pneumonia Detection in Chest X-rays
title A Deep Modality-Specific Ensemble for Improving Pneumonia Detection in Chest X-rays
title_full A Deep Modality-Specific Ensemble for Improving Pneumonia Detection in Chest X-rays
title_fullStr A Deep Modality-Specific Ensemble for Improving Pneumonia Detection in Chest X-rays
title_full_unstemmed A Deep Modality-Specific Ensemble for Improving Pneumonia Detection in Chest X-rays
title_short A Deep Modality-Specific Ensemble for Improving Pneumonia Detection in Chest X-rays
title_sort deep modality-specific ensemble for improving pneumonia detection in chest x-rays
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9221627/
https://www.ncbi.nlm.nih.gov/pubmed/35741252
http://dx.doi.org/10.3390/diagnostics12061442
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