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Excavation of Genes Responsive to Brassinosteroids by Transcriptome Sequencing in Adiantum flabellulatum Gametophytes
Brassinosteroids (BRs) are a class of polyhydroxysteroid plant hormones; they play important roles in the development and stress resistance of plants. The research on BRs has mainly been carried out in angiosperms, but in ferns—research is still limited to the physiological level and is not in-depth...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9222622/ https://www.ncbi.nlm.nih.gov/pubmed/35741824 http://dx.doi.org/10.3390/genes13061061 |
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author | Cai, Zeping Xie, Zhenyu Wang, Xiaochen Zhang, Shuixian Wu, Qian Yu, Xudong Guo, Yi Gao, Shuyi Zhang, Yunge Xu, Shitao Wang, Honggang Luo, Jiajia |
author_facet | Cai, Zeping Xie, Zhenyu Wang, Xiaochen Zhang, Shuixian Wu, Qian Yu, Xudong Guo, Yi Gao, Shuyi Zhang, Yunge Xu, Shitao Wang, Honggang Luo, Jiajia |
author_sort | Cai, Zeping |
collection | PubMed |
description | Brassinosteroids (BRs) are a class of polyhydroxysteroid plant hormones; they play important roles in the development and stress resistance of plants. The research on BRs has mainly been carried out in angiosperms, but in ferns—research is still limited to the physiological level and is not in-depth. In this study, Adiantum flabellulatum gametophytes were used as materials and treated with 10(−6) M brassinolide (BL). The differentially expressed genes (DEGs) responsive to BRs were identified by transcriptome sequencing, GO, KEGG analysis, as well as a quantitative real-time polymerase chain reaction. From this, a total of 8394 DEGs were screened. We found that the expressions of photosynthetic genes were widely inhibited by high concentrations of BL in A. flabellulatum gametophytes. Moreover, we detected many BR synthase genes, except BR6ox2, which may be why castasterone (CS) rather than BL was detected in ferns. Additionally, we identified (for the first time) that the expressions of BR synthase genes (CYP90B1, CYP90C1, CYP90D1, CPD, and BR6ox1) were negatively regulated by BL in fern gametophytes, which indicated that ferns, including gametophytes, also needed the regulatory mechanism for maintaining BR homeostasis. Based on transcriptome sequencing, this study can provide a large number of gene expression data for BRs regulating the development of fern gametophytes. |
format | Online Article Text |
id | pubmed-9222622 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-92226222022-06-24 Excavation of Genes Responsive to Brassinosteroids by Transcriptome Sequencing in Adiantum flabellulatum Gametophytes Cai, Zeping Xie, Zhenyu Wang, Xiaochen Zhang, Shuixian Wu, Qian Yu, Xudong Guo, Yi Gao, Shuyi Zhang, Yunge Xu, Shitao Wang, Honggang Luo, Jiajia Genes (Basel) Article Brassinosteroids (BRs) are a class of polyhydroxysteroid plant hormones; they play important roles in the development and stress resistance of plants. The research on BRs has mainly been carried out in angiosperms, but in ferns—research is still limited to the physiological level and is not in-depth. In this study, Adiantum flabellulatum gametophytes were used as materials and treated with 10(−6) M brassinolide (BL). The differentially expressed genes (DEGs) responsive to BRs were identified by transcriptome sequencing, GO, KEGG analysis, as well as a quantitative real-time polymerase chain reaction. From this, a total of 8394 DEGs were screened. We found that the expressions of photosynthetic genes were widely inhibited by high concentrations of BL in A. flabellulatum gametophytes. Moreover, we detected many BR synthase genes, except BR6ox2, which may be why castasterone (CS) rather than BL was detected in ferns. Additionally, we identified (for the first time) that the expressions of BR synthase genes (CYP90B1, CYP90C1, CYP90D1, CPD, and BR6ox1) were negatively regulated by BL in fern gametophytes, which indicated that ferns, including gametophytes, also needed the regulatory mechanism for maintaining BR homeostasis. Based on transcriptome sequencing, this study can provide a large number of gene expression data for BRs regulating the development of fern gametophytes. MDPI 2022-06-14 /pmc/articles/PMC9222622/ /pubmed/35741824 http://dx.doi.org/10.3390/genes13061061 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Cai, Zeping Xie, Zhenyu Wang, Xiaochen Zhang, Shuixian Wu, Qian Yu, Xudong Guo, Yi Gao, Shuyi Zhang, Yunge Xu, Shitao Wang, Honggang Luo, Jiajia Excavation of Genes Responsive to Brassinosteroids by Transcriptome Sequencing in Adiantum flabellulatum Gametophytes |
title | Excavation of Genes Responsive to Brassinosteroids by Transcriptome Sequencing in Adiantum flabellulatum Gametophytes |
title_full | Excavation of Genes Responsive to Brassinosteroids by Transcriptome Sequencing in Adiantum flabellulatum Gametophytes |
title_fullStr | Excavation of Genes Responsive to Brassinosteroids by Transcriptome Sequencing in Adiantum flabellulatum Gametophytes |
title_full_unstemmed | Excavation of Genes Responsive to Brassinosteroids by Transcriptome Sequencing in Adiantum flabellulatum Gametophytes |
title_short | Excavation of Genes Responsive to Brassinosteroids by Transcriptome Sequencing in Adiantum flabellulatum Gametophytes |
title_sort | excavation of genes responsive to brassinosteroids by transcriptome sequencing in adiantum flabellulatum gametophytes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9222622/ https://www.ncbi.nlm.nih.gov/pubmed/35741824 http://dx.doi.org/10.3390/genes13061061 |
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