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Low-Cost Probabilistic 3D Denoising with Applications for Ultra-Low-Radiation Computed Tomography

We propose a pipeline for synthetic generation of personalized Computer Tomography (CT) images, with a radiation exposure evaluation and a lifetime attributable risk (LAR) assessment. We perform a patient-specific performance evaluation for a broad range of denoising algorithms (including the most p...

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Autores principales: Horenko, Illia, Pospíšil, Lukáš, Vecchi, Edoardo, Albrecht, Steffen, Gerber, Alexander, Rehbock, Beate, Stroh, Albrecht, Gerber, Susanne
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9224620/
https://www.ncbi.nlm.nih.gov/pubmed/35735955
http://dx.doi.org/10.3390/jimaging8060156
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author Horenko, Illia
Pospíšil, Lukáš
Vecchi, Edoardo
Albrecht, Steffen
Gerber, Alexander
Rehbock, Beate
Stroh, Albrecht
Gerber, Susanne
author_facet Horenko, Illia
Pospíšil, Lukáš
Vecchi, Edoardo
Albrecht, Steffen
Gerber, Alexander
Rehbock, Beate
Stroh, Albrecht
Gerber, Susanne
author_sort Horenko, Illia
collection PubMed
description We propose a pipeline for synthetic generation of personalized Computer Tomography (CT) images, with a radiation exposure evaluation and a lifetime attributable risk (LAR) assessment. We perform a patient-specific performance evaluation for a broad range of denoising algorithms (including the most popular deep learning denoising approaches, wavelets-based methods, methods based on Mumford–Shah denoising, etc.), focusing both on accessing the capability to reduce the patient-specific CT-induced LAR and on computational cost scalability. We introduce a parallel Probabilistic Mumford–Shah denoising model (PMS) and show that it markedly-outperforms the compared common denoising methods in denoising quality and cost scaling. In particular, we show that it allows an approximately 22-fold robust patient-specific LAR reduction for infants and a 10-fold LAR reduction for adults. Using a normal laptop, the proposed algorithm for PMS allows cheap and robust (with a multiscale structural similarity index >90%) denoising of very large 2D videos and 3D images (with over [Formula: see text] voxels) that are subject to ultra-strong noise (Gaussian and non-Gaussian) for signal-to-noise ratios far below 1.0. The code is provided for open access.
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spelling pubmed-92246202022-06-24 Low-Cost Probabilistic 3D Denoising with Applications for Ultra-Low-Radiation Computed Tomography Horenko, Illia Pospíšil, Lukáš Vecchi, Edoardo Albrecht, Steffen Gerber, Alexander Rehbock, Beate Stroh, Albrecht Gerber, Susanne J Imaging Article We propose a pipeline for synthetic generation of personalized Computer Tomography (CT) images, with a radiation exposure evaluation and a lifetime attributable risk (LAR) assessment. We perform a patient-specific performance evaluation for a broad range of denoising algorithms (including the most popular deep learning denoising approaches, wavelets-based methods, methods based on Mumford–Shah denoising, etc.), focusing both on accessing the capability to reduce the patient-specific CT-induced LAR and on computational cost scalability. We introduce a parallel Probabilistic Mumford–Shah denoising model (PMS) and show that it markedly-outperforms the compared common denoising methods in denoising quality and cost scaling. In particular, we show that it allows an approximately 22-fold robust patient-specific LAR reduction for infants and a 10-fold LAR reduction for adults. Using a normal laptop, the proposed algorithm for PMS allows cheap and robust (with a multiscale structural similarity index >90%) denoising of very large 2D videos and 3D images (with over [Formula: see text] voxels) that are subject to ultra-strong noise (Gaussian and non-Gaussian) for signal-to-noise ratios far below 1.0. The code is provided for open access. MDPI 2022-05-31 /pmc/articles/PMC9224620/ /pubmed/35735955 http://dx.doi.org/10.3390/jimaging8060156 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Horenko, Illia
Pospíšil, Lukáš
Vecchi, Edoardo
Albrecht, Steffen
Gerber, Alexander
Rehbock, Beate
Stroh, Albrecht
Gerber, Susanne
Low-Cost Probabilistic 3D Denoising with Applications for Ultra-Low-Radiation Computed Tomography
title Low-Cost Probabilistic 3D Denoising with Applications for Ultra-Low-Radiation Computed Tomography
title_full Low-Cost Probabilistic 3D Denoising with Applications for Ultra-Low-Radiation Computed Tomography
title_fullStr Low-Cost Probabilistic 3D Denoising with Applications for Ultra-Low-Radiation Computed Tomography
title_full_unstemmed Low-Cost Probabilistic 3D Denoising with Applications for Ultra-Low-Radiation Computed Tomography
title_short Low-Cost Probabilistic 3D Denoising with Applications for Ultra-Low-Radiation Computed Tomography
title_sort low-cost probabilistic 3d denoising with applications for ultra-low-radiation computed tomography
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9224620/
https://www.ncbi.nlm.nih.gov/pubmed/35735955
http://dx.doi.org/10.3390/jimaging8060156
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