Cargando…

A Global Overview of Diversity and Phylogeny of the Rust Genus Uromyces

Uromyces is the second-largest plant pathogenic rust genus, is responsible for numerous diseases, and has major effects on both agricultural and non-agricultural plants. The genus is generally characterized by its unicellular teliospores that help to characterize it and distinguish it from another i...

Descripción completa

Detalles Bibliográficos
Autores principales: Gautam, Ajay Kumar, Avasthi, Shubhi, Verma, Rajnish Kumar, Sushma, Niranjan, Mekala, Devadatha, Bandarupalli, Jayawardena, Ruvishika S., Suwannarach, Nakarin, Karunarathna, Samantha C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9224716/
https://www.ncbi.nlm.nih.gov/pubmed/35736116
http://dx.doi.org/10.3390/jof8060633
_version_ 1784733436353708032
author Gautam, Ajay Kumar
Avasthi, Shubhi
Verma, Rajnish Kumar
Sushma,
Niranjan, Mekala
Devadatha, Bandarupalli
Jayawardena, Ruvishika S.
Suwannarach, Nakarin
Karunarathna, Samantha C.
author_facet Gautam, Ajay Kumar
Avasthi, Shubhi
Verma, Rajnish Kumar
Sushma,
Niranjan, Mekala
Devadatha, Bandarupalli
Jayawardena, Ruvishika S.
Suwannarach, Nakarin
Karunarathna, Samantha C.
author_sort Gautam, Ajay Kumar
collection PubMed
description Uromyces is the second-largest plant pathogenic rust genus, is responsible for numerous diseases, and has major effects on both agricultural and non-agricultural plants. The genus is generally characterized by its unicellular teliospores that help to characterize it and distinguish it from another important rust genus, Puccinia. In this study, a global overview of the diversity and distribution of Uromyces is presented based on both online and offline resources. The information obtained was analyzed for numerical and graphical summaries to provide the diversity and distribution of the genus by country and continent. Besides this, broad taxonomical aspects, a brief life cycle, and other comparative aspects on diversity and distribution were also provided. In addition, a phylogenetic analysis based on the ITS and nLSU DNA sequence data available in GenBank and published literature was performed to examine the intergeneric relationships of Uromyces. The results obtained revealed that the rust genus is found distributed over 150 countries, territories, and occupancies of the world on around 647 plant genera belonging to 95 plant families. Phylogenetic studies based on LSU and ITS sequence data revealed that Uromyces species are polyphyletic and require more DNA-based analyses for a better understanding of their taxonomic placement.
format Online
Article
Text
id pubmed-9224716
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-92247162022-06-24 A Global Overview of Diversity and Phylogeny of the Rust Genus Uromyces Gautam, Ajay Kumar Avasthi, Shubhi Verma, Rajnish Kumar Sushma, Niranjan, Mekala Devadatha, Bandarupalli Jayawardena, Ruvishika S. Suwannarach, Nakarin Karunarathna, Samantha C. J Fungi (Basel) Review Uromyces is the second-largest plant pathogenic rust genus, is responsible for numerous diseases, and has major effects on both agricultural and non-agricultural plants. The genus is generally characterized by its unicellular teliospores that help to characterize it and distinguish it from another important rust genus, Puccinia. In this study, a global overview of the diversity and distribution of Uromyces is presented based on both online and offline resources. The information obtained was analyzed for numerical and graphical summaries to provide the diversity and distribution of the genus by country and continent. Besides this, broad taxonomical aspects, a brief life cycle, and other comparative aspects on diversity and distribution were also provided. In addition, a phylogenetic analysis based on the ITS and nLSU DNA sequence data available in GenBank and published literature was performed to examine the intergeneric relationships of Uromyces. The results obtained revealed that the rust genus is found distributed over 150 countries, territories, and occupancies of the world on around 647 plant genera belonging to 95 plant families. Phylogenetic studies based on LSU and ITS sequence data revealed that Uromyces species are polyphyletic and require more DNA-based analyses for a better understanding of their taxonomic placement. MDPI 2022-06-14 /pmc/articles/PMC9224716/ /pubmed/35736116 http://dx.doi.org/10.3390/jof8060633 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Gautam, Ajay Kumar
Avasthi, Shubhi
Verma, Rajnish Kumar
Sushma,
Niranjan, Mekala
Devadatha, Bandarupalli
Jayawardena, Ruvishika S.
Suwannarach, Nakarin
Karunarathna, Samantha C.
A Global Overview of Diversity and Phylogeny of the Rust Genus Uromyces
title A Global Overview of Diversity and Phylogeny of the Rust Genus Uromyces
title_full A Global Overview of Diversity and Phylogeny of the Rust Genus Uromyces
title_fullStr A Global Overview of Diversity and Phylogeny of the Rust Genus Uromyces
title_full_unstemmed A Global Overview of Diversity and Phylogeny of the Rust Genus Uromyces
title_short A Global Overview of Diversity and Phylogeny of the Rust Genus Uromyces
title_sort global overview of diversity and phylogeny of the rust genus uromyces
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9224716/
https://www.ncbi.nlm.nih.gov/pubmed/35736116
http://dx.doi.org/10.3390/jof8060633
work_keys_str_mv AT gautamajaykumar aglobaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT avasthishubhi aglobaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT vermarajnishkumar aglobaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT sushma aglobaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT niranjanmekala aglobaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT devadathabandarupalli aglobaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT jayawardenaruvishikas aglobaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT suwannarachnakarin aglobaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT karunarathnasamanthac aglobaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT gautamajaykumar globaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT avasthishubhi globaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT vermarajnishkumar globaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT sushma globaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT niranjanmekala globaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT devadathabandarupalli globaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT jayawardenaruvishikas globaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT suwannarachnakarin globaloverviewofdiversityandphylogenyoftherustgenusuromyces
AT karunarathnasamanthac globaloverviewofdiversityandphylogenyoftherustgenusuromyces