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First Comprehensive Analysis of Both Mitochondrial Characteristics and Mitogenome-Based Phylogenetics in the Subfamily Eumeninae (Hymenoptera: Vespidae)
SIMPLE SUMMARY: The subfamily Eumeninae comprises more than 3900 described species and eumenine mitochondrial analyses are almost absent. In order to provide further evidence toward understanding the relationships within the subfamily, the characteristics of 54 eumenine mitogenomes were comparativel...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9225260/ https://www.ncbi.nlm.nih.gov/pubmed/35735866 http://dx.doi.org/10.3390/insects13060529 |
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author | Luo, Li Carpenter, James M. Chen, Bin Li, Tingjing |
author_facet | Luo, Li Carpenter, James M. Chen, Bin Li, Tingjing |
author_sort | Luo, Li |
collection | PubMed |
description | SIMPLE SUMMARY: The subfamily Eumeninae comprises more than 3900 described species and eumenine mitochondrial analyses are almost absent. In order to provide further evidence toward understanding the relationships within the subfamily, the characteristics of 54 eumenine mitogenomes were comparatively analyzed, among which 52 mitogenomes are newly annotated. Meanwhile, using both Maximum-likelihood (ML) and Bayesian inference (BI), comprehensive phylogenetic relationship in the subfamily were investigated based on two mitochondrial datasets. ABSTRACT: The subfamily Eumeninae plays a significant role in the biological control of agricultural pests. However, the characteristics of eumenine mitogenomes that are important molecular markers for phylogenetics are not clearly revealed. Here, 52 eumenine mitogenomes are newly sequenced and annotated, and the phylogenetic relationships of the subfamily are comprehensively analyzed based on 87 vespid mitogenomes. Through the comparative analysis of the 54 eumenine mitogenomes, the gene compositions of about one half of the 54 species match with ancestral insect mitogenome, and remaining others contain two trnM which are highly similar, with 51.86% (Eumenes tripunctatus) to 90.65% (Pseumenes nigripectus) sequence identities, which is unique among the reported mitogenomes of the family Vespidae. Moreover, the translocation trnL1 upstream of nad1 is a common rearrangement event in all eumenine mitogenomes. The results of phylogenetic analyses support the paraphyly of the subfamily Eumeninae and the tribe Odynerini, respectively, and the monophyly of the tribe Eumenini, and verify that the tribe Zethini is a valid subfamily Zethinae. In this study, the relationships between some genera such as Allorhynchium and Pararrhynchium or the taxonomic status of the subgenera such as Eremodynerus and Dirhynchium are found to be confusing and there should be further inquiry with more samples. |
format | Online Article Text |
id | pubmed-9225260 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-92252602022-06-24 First Comprehensive Analysis of Both Mitochondrial Characteristics and Mitogenome-Based Phylogenetics in the Subfamily Eumeninae (Hymenoptera: Vespidae) Luo, Li Carpenter, James M. Chen, Bin Li, Tingjing Insects Article SIMPLE SUMMARY: The subfamily Eumeninae comprises more than 3900 described species and eumenine mitochondrial analyses are almost absent. In order to provide further evidence toward understanding the relationships within the subfamily, the characteristics of 54 eumenine mitogenomes were comparatively analyzed, among which 52 mitogenomes are newly annotated. Meanwhile, using both Maximum-likelihood (ML) and Bayesian inference (BI), comprehensive phylogenetic relationship in the subfamily were investigated based on two mitochondrial datasets. ABSTRACT: The subfamily Eumeninae plays a significant role in the biological control of agricultural pests. However, the characteristics of eumenine mitogenomes that are important molecular markers for phylogenetics are not clearly revealed. Here, 52 eumenine mitogenomes are newly sequenced and annotated, and the phylogenetic relationships of the subfamily are comprehensively analyzed based on 87 vespid mitogenomes. Through the comparative analysis of the 54 eumenine mitogenomes, the gene compositions of about one half of the 54 species match with ancestral insect mitogenome, and remaining others contain two trnM which are highly similar, with 51.86% (Eumenes tripunctatus) to 90.65% (Pseumenes nigripectus) sequence identities, which is unique among the reported mitogenomes of the family Vespidae. Moreover, the translocation trnL1 upstream of nad1 is a common rearrangement event in all eumenine mitogenomes. The results of phylogenetic analyses support the paraphyly of the subfamily Eumeninae and the tribe Odynerini, respectively, and the monophyly of the tribe Eumenini, and verify that the tribe Zethini is a valid subfamily Zethinae. In this study, the relationships between some genera such as Allorhynchium and Pararrhynchium or the taxonomic status of the subgenera such as Eremodynerus and Dirhynchium are found to be confusing and there should be further inquiry with more samples. MDPI 2022-06-08 /pmc/articles/PMC9225260/ /pubmed/35735866 http://dx.doi.org/10.3390/insects13060529 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Luo, Li Carpenter, James M. Chen, Bin Li, Tingjing First Comprehensive Analysis of Both Mitochondrial Characteristics and Mitogenome-Based Phylogenetics in the Subfamily Eumeninae (Hymenoptera: Vespidae) |
title | First Comprehensive Analysis of Both Mitochondrial Characteristics and Mitogenome-Based Phylogenetics in the Subfamily Eumeninae (Hymenoptera: Vespidae) |
title_full | First Comprehensive Analysis of Both Mitochondrial Characteristics and Mitogenome-Based Phylogenetics in the Subfamily Eumeninae (Hymenoptera: Vespidae) |
title_fullStr | First Comprehensive Analysis of Both Mitochondrial Characteristics and Mitogenome-Based Phylogenetics in the Subfamily Eumeninae (Hymenoptera: Vespidae) |
title_full_unstemmed | First Comprehensive Analysis of Both Mitochondrial Characteristics and Mitogenome-Based Phylogenetics in the Subfamily Eumeninae (Hymenoptera: Vespidae) |
title_short | First Comprehensive Analysis of Both Mitochondrial Characteristics and Mitogenome-Based Phylogenetics in the Subfamily Eumeninae (Hymenoptera: Vespidae) |
title_sort | first comprehensive analysis of both mitochondrial characteristics and mitogenome-based phylogenetics in the subfamily eumeninae (hymenoptera: vespidae) |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9225260/ https://www.ncbi.nlm.nih.gov/pubmed/35735866 http://dx.doi.org/10.3390/insects13060529 |
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