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Machine Learning Approaches for Rice Seedling Growth Stages Detection

Recognizing rice seedling growth stages to timely do field operations, such as temperature control, fertilizer, irrigation, cultivation, and disease control, is of great significance of crop management, provision of standard and well-nourished seedlings for mechanical transplanting, and increase of...

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Autores principales: Tan, Suiyan, Liu, Jingbin, Lu, Henghui, Lan, Maoyang, Yu, Jie, Liao, Guanzhong, Wang, Yuwei, Li, Zehua, Qi, Long, Ma, Xu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9225317/
https://www.ncbi.nlm.nih.gov/pubmed/35755682
http://dx.doi.org/10.3389/fpls.2022.914771
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author Tan, Suiyan
Liu, Jingbin
Lu, Henghui
Lan, Maoyang
Yu, Jie
Liao, Guanzhong
Wang, Yuwei
Li, Zehua
Qi, Long
Ma, Xu
author_facet Tan, Suiyan
Liu, Jingbin
Lu, Henghui
Lan, Maoyang
Yu, Jie
Liao, Guanzhong
Wang, Yuwei
Li, Zehua
Qi, Long
Ma, Xu
author_sort Tan, Suiyan
collection PubMed
description Recognizing rice seedling growth stages to timely do field operations, such as temperature control, fertilizer, irrigation, cultivation, and disease control, is of great significance of crop management, provision of standard and well-nourished seedlings for mechanical transplanting, and increase of yield. Conventionally, rice seedling growth stage is performed manually by means of visual inspection, which is not only labor-intensive and time-consuming, but also subjective and inefficient on a large-scale field. The application of machine learning algorithms on UAV images offers a high-throughput and non-invasive alternative to manual observations and its applications in agriculture and high-throughput phenotyping are increasing. This paper presented automatic approaches to detect rice seedling of three critical stages, BBCH11, BBCH12, and BBCH13. Both traditional machine learning algorithms and deep learning algorithms were investigated the discriminative ability of the three growth stages. UAV images were captured vertically downward at 3-m height from the field. A dataset consisted of images of three growth stages of rice seedlings for three cultivars, five nursing seedling densities, and different sowing dates. In the traditional machine learning algorithm, histograms of oriented gradients (HOGs) were selected as texture features and combined with the support vector machine (SVM) classifier to recognize and classify three growth stages. The best HOG-SVM model obtained the performance with 84.9, 85.9, 84.9, and 85.4% in accuracy, average precision, average recall, and F1 score, respectively. In the deep learning algorithm, the Efficientnet family and other state-of-art CNN models (VGG16, Resnet50, and Densenet121) were adopted and investigated the performance of three growth stage classifications. EfficientnetB4 achieved the best performance among other CNN models, with 99.47, 99.53, 99.39, and 99.46% in accuracy, average precision, average recall, and F1 score, respectively. Thus, the proposed method could be effective and efficient tool to detect rice seedling growth stages.
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spelling pubmed-92253172022-06-24 Machine Learning Approaches for Rice Seedling Growth Stages Detection Tan, Suiyan Liu, Jingbin Lu, Henghui Lan, Maoyang Yu, Jie Liao, Guanzhong Wang, Yuwei Li, Zehua Qi, Long Ma, Xu Front Plant Sci Plant Science Recognizing rice seedling growth stages to timely do field operations, such as temperature control, fertilizer, irrigation, cultivation, and disease control, is of great significance of crop management, provision of standard and well-nourished seedlings for mechanical transplanting, and increase of yield. Conventionally, rice seedling growth stage is performed manually by means of visual inspection, which is not only labor-intensive and time-consuming, but also subjective and inefficient on a large-scale field. The application of machine learning algorithms on UAV images offers a high-throughput and non-invasive alternative to manual observations and its applications in agriculture and high-throughput phenotyping are increasing. This paper presented automatic approaches to detect rice seedling of three critical stages, BBCH11, BBCH12, and BBCH13. Both traditional machine learning algorithms and deep learning algorithms were investigated the discriminative ability of the three growth stages. UAV images were captured vertically downward at 3-m height from the field. A dataset consisted of images of three growth stages of rice seedlings for three cultivars, five nursing seedling densities, and different sowing dates. In the traditional machine learning algorithm, histograms of oriented gradients (HOGs) were selected as texture features and combined with the support vector machine (SVM) classifier to recognize and classify three growth stages. The best HOG-SVM model obtained the performance with 84.9, 85.9, 84.9, and 85.4% in accuracy, average precision, average recall, and F1 score, respectively. In the deep learning algorithm, the Efficientnet family and other state-of-art CNN models (VGG16, Resnet50, and Densenet121) were adopted and investigated the performance of three growth stage classifications. EfficientnetB4 achieved the best performance among other CNN models, with 99.47, 99.53, 99.39, and 99.46% in accuracy, average precision, average recall, and F1 score, respectively. Thus, the proposed method could be effective and efficient tool to detect rice seedling growth stages. Frontiers Media S.A. 2022-06-09 /pmc/articles/PMC9225317/ /pubmed/35755682 http://dx.doi.org/10.3389/fpls.2022.914771 Text en Copyright © 2022 Tan, Liu, Lu, Lan, Yu, Liao, Wang, Li, Qi and Ma. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Tan, Suiyan
Liu, Jingbin
Lu, Henghui
Lan, Maoyang
Yu, Jie
Liao, Guanzhong
Wang, Yuwei
Li, Zehua
Qi, Long
Ma, Xu
Machine Learning Approaches for Rice Seedling Growth Stages Detection
title Machine Learning Approaches for Rice Seedling Growth Stages Detection
title_full Machine Learning Approaches for Rice Seedling Growth Stages Detection
title_fullStr Machine Learning Approaches for Rice Seedling Growth Stages Detection
title_full_unstemmed Machine Learning Approaches for Rice Seedling Growth Stages Detection
title_short Machine Learning Approaches for Rice Seedling Growth Stages Detection
title_sort machine learning approaches for rice seedling growth stages detection
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9225317/
https://www.ncbi.nlm.nih.gov/pubmed/35755682
http://dx.doi.org/10.3389/fpls.2022.914771
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