Cargando…

Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota

Based on several reports that indicate the presence of blood microbiota in patients with diseases, we became interested in identifying the presence of bacteria in the blood of healthy individuals. Using 37 samples from 5 families, we extracted sequences that were not mapped to the human reference ge...

Descripción completa

Detalles Bibliográficos
Autores principales: Lee, Eun-Ju, Sung, Joohon, Kim, Hyung-Lae, Kim, Han-Na
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9225573/
https://www.ncbi.nlm.nih.gov/pubmed/35743724
http://dx.doi.org/10.3390/jpm12060939
_version_ 1784733647572566016
author Lee, Eun-Ju
Sung, Joohon
Kim, Hyung-Lae
Kim, Han-Na
author_facet Lee, Eun-Ju
Sung, Joohon
Kim, Hyung-Lae
Kim, Han-Na
author_sort Lee, Eun-Ju
collection PubMed
description Based on several reports that indicate the presence of blood microbiota in patients with diseases, we became interested in identifying the presence of bacteria in the blood of healthy individuals. Using 37 samples from 5 families, we extracted sequences that were not mapped to the human reference genome and mapped them to the bacterial reference genome for characterization. Proteobacteria account for more than 95% of the blood microbiota. The results of clustering by means of principal component analysis showed similar patterns for each age group. We observed that the class Gammaproteobacteria was significantly higher in the elderly group (over 60 years old), whereas the arcsine square root-transformed relative abundance of the classes Alphaproteobacteria, Deltaproteobacteria, and Clostridia was significantly lower (p < 0.05). In addition, the diversity among the groups showed a significant difference (p < 0.05) in the elderly group. This result provides meaningful evidence of a consistent phenomenon that chronic diseases associated with aging are accompanied by metabolic endotoxemia and chronic inflammation.
format Online
Article
Text
id pubmed-9225573
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-92255732022-06-24 Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota Lee, Eun-Ju Sung, Joohon Kim, Hyung-Lae Kim, Han-Na J Pers Med Article Based on several reports that indicate the presence of blood microbiota in patients with diseases, we became interested in identifying the presence of bacteria in the blood of healthy individuals. Using 37 samples from 5 families, we extracted sequences that were not mapped to the human reference genome and mapped them to the bacterial reference genome for characterization. Proteobacteria account for more than 95% of the blood microbiota. The results of clustering by means of principal component analysis showed similar patterns for each age group. We observed that the class Gammaproteobacteria was significantly higher in the elderly group (over 60 years old), whereas the arcsine square root-transformed relative abundance of the classes Alphaproteobacteria, Deltaproteobacteria, and Clostridia was significantly lower (p < 0.05). In addition, the diversity among the groups showed a significant difference (p < 0.05) in the elderly group. This result provides meaningful evidence of a consistent phenomenon that chronic diseases associated with aging are accompanied by metabolic endotoxemia and chronic inflammation. MDPI 2022-06-07 /pmc/articles/PMC9225573/ /pubmed/35743724 http://dx.doi.org/10.3390/jpm12060939 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Lee, Eun-Ju
Sung, Joohon
Kim, Hyung-Lae
Kim, Han-Na
Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota
title Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota
title_full Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota
title_fullStr Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota
title_full_unstemmed Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota
title_short Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota
title_sort whole-genome sequencing reveals age-specific changes in the human blood microbiota
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9225573/
https://www.ncbi.nlm.nih.gov/pubmed/35743724
http://dx.doi.org/10.3390/jpm12060939
work_keys_str_mv AT leeeunju wholegenomesequencingrevealsagespecificchangesinthehumanbloodmicrobiota
AT sungjoohon wholegenomesequencingrevealsagespecificchangesinthehumanbloodmicrobiota
AT kimhyunglae wholegenomesequencingrevealsagespecificchangesinthehumanbloodmicrobiota
AT kimhanna wholegenomesequencingrevealsagespecificchangesinthehumanbloodmicrobiota