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Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota
Based on several reports that indicate the presence of blood microbiota in patients with diseases, we became interested in identifying the presence of bacteria in the blood of healthy individuals. Using 37 samples from 5 families, we extracted sequences that were not mapped to the human reference ge...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9225573/ https://www.ncbi.nlm.nih.gov/pubmed/35743724 http://dx.doi.org/10.3390/jpm12060939 |
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author | Lee, Eun-Ju Sung, Joohon Kim, Hyung-Lae Kim, Han-Na |
author_facet | Lee, Eun-Ju Sung, Joohon Kim, Hyung-Lae Kim, Han-Na |
author_sort | Lee, Eun-Ju |
collection | PubMed |
description | Based on several reports that indicate the presence of blood microbiota in patients with diseases, we became interested in identifying the presence of bacteria in the blood of healthy individuals. Using 37 samples from 5 families, we extracted sequences that were not mapped to the human reference genome and mapped them to the bacterial reference genome for characterization. Proteobacteria account for more than 95% of the blood microbiota. The results of clustering by means of principal component analysis showed similar patterns for each age group. We observed that the class Gammaproteobacteria was significantly higher in the elderly group (over 60 years old), whereas the arcsine square root-transformed relative abundance of the classes Alphaproteobacteria, Deltaproteobacteria, and Clostridia was significantly lower (p < 0.05). In addition, the diversity among the groups showed a significant difference (p < 0.05) in the elderly group. This result provides meaningful evidence of a consistent phenomenon that chronic diseases associated with aging are accompanied by metabolic endotoxemia and chronic inflammation. |
format | Online Article Text |
id | pubmed-9225573 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-92255732022-06-24 Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota Lee, Eun-Ju Sung, Joohon Kim, Hyung-Lae Kim, Han-Na J Pers Med Article Based on several reports that indicate the presence of blood microbiota in patients with diseases, we became interested in identifying the presence of bacteria in the blood of healthy individuals. Using 37 samples from 5 families, we extracted sequences that were not mapped to the human reference genome and mapped them to the bacterial reference genome for characterization. Proteobacteria account for more than 95% of the blood microbiota. The results of clustering by means of principal component analysis showed similar patterns for each age group. We observed that the class Gammaproteobacteria was significantly higher in the elderly group (over 60 years old), whereas the arcsine square root-transformed relative abundance of the classes Alphaproteobacteria, Deltaproteobacteria, and Clostridia was significantly lower (p < 0.05). In addition, the diversity among the groups showed a significant difference (p < 0.05) in the elderly group. This result provides meaningful evidence of a consistent phenomenon that chronic diseases associated with aging are accompanied by metabolic endotoxemia and chronic inflammation. MDPI 2022-06-07 /pmc/articles/PMC9225573/ /pubmed/35743724 http://dx.doi.org/10.3390/jpm12060939 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Lee, Eun-Ju Sung, Joohon Kim, Hyung-Lae Kim, Han-Na Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota |
title | Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota |
title_full | Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota |
title_fullStr | Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota |
title_full_unstemmed | Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota |
title_short | Whole-Genome Sequencing Reveals Age-Specific Changes in the Human Blood Microbiota |
title_sort | whole-genome sequencing reveals age-specific changes in the human blood microbiota |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9225573/ https://www.ncbi.nlm.nih.gov/pubmed/35743724 http://dx.doi.org/10.3390/jpm12060939 |
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