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The complete chloroplast genome of Utricularia tenuicaulis Miki (Lentibulariaceae) isolated in Korea

Utricularia tenuicaulis Miki 1935 is an aquatic carnivorous plant species found in East Asia including Korea and Japan. In this study, the chloroplast genome of U. tenuicaulis was successfully sequenced. The assembled genome (153,976 bp; GC ratio, 37.0%) contains four subregions, with the large sing...

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Autores principales: Park, Jongsun, Xi, Hong, Kim, Yongsung, Kim, Sang-Tae
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9225771/
https://www.ncbi.nlm.nih.gov/pubmed/35756452
http://dx.doi.org/10.1080/23802359.2022.2080597
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author Park, Jongsun
Xi, Hong
Kim, Yongsung
Kim, Sang-Tae
author_facet Park, Jongsun
Xi, Hong
Kim, Yongsung
Kim, Sang-Tae
author_sort Park, Jongsun
collection PubMed
description Utricularia tenuicaulis Miki 1935 is an aquatic carnivorous plant species found in East Asia including Korea and Japan. In this study, the chloroplast genome of U. tenuicaulis was successfully sequenced. The assembled genome (153,976 bp; GC ratio, 37.0%) contains four subregions, with the large single copy (LSC; 84,596 bp; 34.9%) and small single copy (SSC; 17,946 bp; 30.5%) regions separated by 25,718 bp of inverted repeat regions (42.7%), and includes 126 genes (81 protein-coding genes, 8 rRNAs, and 37 tRNAs). Phylogenetic analyses based on the whole-chloroplast genomes of 18 species, including 17 Lentibulariaceae species and one outgroup species, suggest a close relationship between U. tenuicaulis and Utricularia macrorhiza Leconte 1824. A comparison of genomic variation between U. tenuicaulis and U. macrorhiza confirmed the validity of the specific discrimination of U. tenuicaulis.
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spelling pubmed-92257712022-06-24 The complete chloroplast genome of Utricularia tenuicaulis Miki (Lentibulariaceae) isolated in Korea Park, Jongsun Xi, Hong Kim, Yongsung Kim, Sang-Tae Mitochondrial DNA B Resour Plastome Announcement Utricularia tenuicaulis Miki 1935 is an aquatic carnivorous plant species found in East Asia including Korea and Japan. In this study, the chloroplast genome of U. tenuicaulis was successfully sequenced. The assembled genome (153,976 bp; GC ratio, 37.0%) contains four subregions, with the large single copy (LSC; 84,596 bp; 34.9%) and small single copy (SSC; 17,946 bp; 30.5%) regions separated by 25,718 bp of inverted repeat regions (42.7%), and includes 126 genes (81 protein-coding genes, 8 rRNAs, and 37 tRNAs). Phylogenetic analyses based on the whole-chloroplast genomes of 18 species, including 17 Lentibulariaceae species and one outgroup species, suggest a close relationship between U. tenuicaulis and Utricularia macrorhiza Leconte 1824. A comparison of genomic variation between U. tenuicaulis and U. macrorhiza confirmed the validity of the specific discrimination of U. tenuicaulis. Taylor & Francis 2022-06-20 /pmc/articles/PMC9225771/ /pubmed/35756452 http://dx.doi.org/10.1080/23802359.2022.2080597 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Park, Jongsun
Xi, Hong
Kim, Yongsung
Kim, Sang-Tae
The complete chloroplast genome of Utricularia tenuicaulis Miki (Lentibulariaceae) isolated in Korea
title The complete chloroplast genome of Utricularia tenuicaulis Miki (Lentibulariaceae) isolated in Korea
title_full The complete chloroplast genome of Utricularia tenuicaulis Miki (Lentibulariaceae) isolated in Korea
title_fullStr The complete chloroplast genome of Utricularia tenuicaulis Miki (Lentibulariaceae) isolated in Korea
title_full_unstemmed The complete chloroplast genome of Utricularia tenuicaulis Miki (Lentibulariaceae) isolated in Korea
title_short The complete chloroplast genome of Utricularia tenuicaulis Miki (Lentibulariaceae) isolated in Korea
title_sort complete chloroplast genome of utricularia tenuicaulis miki (lentibulariaceae) isolated in korea
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9225771/
https://www.ncbi.nlm.nih.gov/pubmed/35756452
http://dx.doi.org/10.1080/23802359.2022.2080597
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