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40S hnRNP particles are a novel class of nuclear biomolecular condensates

Heterogenous nuclear ribonucleoproteins (hnRNPs) are abundant proteins implicated in various steps of RNA processing that assemble on nuclear RNA into larger complexes termed 40S hnRNP particles. Despite their initial discovery 55 years ago, our understanding of these intriguing macromolecular assem...

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Autores principales: Domanski, Michal, Dedic, Emil, Pérez, Maria Escura, Cléry, Antoine, Campagne, Sébastien, Uldry, Anne-Christine, Braga, Sophie, Heller, Manfred, Rabl, Julius, Afanasyev, Pavel, Boehringer, Daniel, Nováček, Jiří, Allain, Frédéric T, Mühlemann, Oliver
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9226511/
https://www.ncbi.nlm.nih.gov/pubmed/35687109
http://dx.doi.org/10.1093/nar/gkac457
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author Domanski, Michal
Dedic, Emil
Pérez, Maria Escura
Cléry, Antoine
Campagne, Sébastien
Uldry, Anne-Christine
Braga, Sophie
Heller, Manfred
Rabl, Julius
Afanasyev, Pavel
Boehringer, Daniel
Nováček, Jiří
Allain, Frédéric T
Mühlemann, Oliver
author_facet Domanski, Michal
Dedic, Emil
Pérez, Maria Escura
Cléry, Antoine
Campagne, Sébastien
Uldry, Anne-Christine
Braga, Sophie
Heller, Manfred
Rabl, Julius
Afanasyev, Pavel
Boehringer, Daniel
Nováček, Jiří
Allain, Frédéric T
Mühlemann, Oliver
author_sort Domanski, Michal
collection PubMed
description Heterogenous nuclear ribonucleoproteins (hnRNPs) are abundant proteins implicated in various steps of RNA processing that assemble on nuclear RNA into larger complexes termed 40S hnRNP particles. Despite their initial discovery 55 years ago, our understanding of these intriguing macromolecular assemblies remains limited. Here, we report the biochemical purification of native 40S hnRNP particles and the determination of their complete protein composition by label-free quantitative mass spectrometry, identifying A-group and C-group hnRNPs as the major protein constituents. Isolated 40S hnRNP particles dissociate upon RNA digestion and can be reconstituted in vitro on defined RNAs in the presence of the individual protein components, demonstrating a scaffolding role for RNA in nucleating particle formation. Finally, we revealed their nanometer scale, condensate-like nature, promoted by intrinsically disordered regions of A-group hnRNPs. Collectively, we identify nuclear 40S hnRNP particles as novel dynamic biomolecular condensates.
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spelling pubmed-92265112022-06-28 40S hnRNP particles are a novel class of nuclear biomolecular condensates Domanski, Michal Dedic, Emil Pérez, Maria Escura Cléry, Antoine Campagne, Sébastien Uldry, Anne-Christine Braga, Sophie Heller, Manfred Rabl, Julius Afanasyev, Pavel Boehringer, Daniel Nováček, Jiří Allain, Frédéric T Mühlemann, Oliver Nucleic Acids Res Molecular Biology Heterogenous nuclear ribonucleoproteins (hnRNPs) are abundant proteins implicated in various steps of RNA processing that assemble on nuclear RNA into larger complexes termed 40S hnRNP particles. Despite their initial discovery 55 years ago, our understanding of these intriguing macromolecular assemblies remains limited. Here, we report the biochemical purification of native 40S hnRNP particles and the determination of their complete protein composition by label-free quantitative mass spectrometry, identifying A-group and C-group hnRNPs as the major protein constituents. Isolated 40S hnRNP particles dissociate upon RNA digestion and can be reconstituted in vitro on defined RNAs in the presence of the individual protein components, demonstrating a scaffolding role for RNA in nucleating particle formation. Finally, we revealed their nanometer scale, condensate-like nature, promoted by intrinsically disordered regions of A-group hnRNPs. Collectively, we identify nuclear 40S hnRNP particles as novel dynamic biomolecular condensates. Oxford University Press 2022-06-10 /pmc/articles/PMC9226511/ /pubmed/35687109 http://dx.doi.org/10.1093/nar/gkac457 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Molecular Biology
Domanski, Michal
Dedic, Emil
Pérez, Maria Escura
Cléry, Antoine
Campagne, Sébastien
Uldry, Anne-Christine
Braga, Sophie
Heller, Manfred
Rabl, Julius
Afanasyev, Pavel
Boehringer, Daniel
Nováček, Jiří
Allain, Frédéric T
Mühlemann, Oliver
40S hnRNP particles are a novel class of nuclear biomolecular condensates
title 40S hnRNP particles are a novel class of nuclear biomolecular condensates
title_full 40S hnRNP particles are a novel class of nuclear biomolecular condensates
title_fullStr 40S hnRNP particles are a novel class of nuclear biomolecular condensates
title_full_unstemmed 40S hnRNP particles are a novel class of nuclear biomolecular condensates
title_short 40S hnRNP particles are a novel class of nuclear biomolecular condensates
title_sort 40s hnrnp particles are a novel class of nuclear biomolecular condensates
topic Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9226511/
https://www.ncbi.nlm.nih.gov/pubmed/35687109
http://dx.doi.org/10.1093/nar/gkac457
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