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40S hnRNP particles are a novel class of nuclear biomolecular condensates
Heterogenous nuclear ribonucleoproteins (hnRNPs) are abundant proteins implicated in various steps of RNA processing that assemble on nuclear RNA into larger complexes termed 40S hnRNP particles. Despite their initial discovery 55 years ago, our understanding of these intriguing macromolecular assem...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9226511/ https://www.ncbi.nlm.nih.gov/pubmed/35687109 http://dx.doi.org/10.1093/nar/gkac457 |
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author | Domanski, Michal Dedic, Emil Pérez, Maria Escura Cléry, Antoine Campagne, Sébastien Uldry, Anne-Christine Braga, Sophie Heller, Manfred Rabl, Julius Afanasyev, Pavel Boehringer, Daniel Nováček, Jiří Allain, Frédéric T Mühlemann, Oliver |
author_facet | Domanski, Michal Dedic, Emil Pérez, Maria Escura Cléry, Antoine Campagne, Sébastien Uldry, Anne-Christine Braga, Sophie Heller, Manfred Rabl, Julius Afanasyev, Pavel Boehringer, Daniel Nováček, Jiří Allain, Frédéric T Mühlemann, Oliver |
author_sort | Domanski, Michal |
collection | PubMed |
description | Heterogenous nuclear ribonucleoproteins (hnRNPs) are abundant proteins implicated in various steps of RNA processing that assemble on nuclear RNA into larger complexes termed 40S hnRNP particles. Despite their initial discovery 55 years ago, our understanding of these intriguing macromolecular assemblies remains limited. Here, we report the biochemical purification of native 40S hnRNP particles and the determination of their complete protein composition by label-free quantitative mass spectrometry, identifying A-group and C-group hnRNPs as the major protein constituents. Isolated 40S hnRNP particles dissociate upon RNA digestion and can be reconstituted in vitro on defined RNAs in the presence of the individual protein components, demonstrating a scaffolding role for RNA in nucleating particle formation. Finally, we revealed their nanometer scale, condensate-like nature, promoted by intrinsically disordered regions of A-group hnRNPs. Collectively, we identify nuclear 40S hnRNP particles as novel dynamic biomolecular condensates. |
format | Online Article Text |
id | pubmed-9226511 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-92265112022-06-28 40S hnRNP particles are a novel class of nuclear biomolecular condensates Domanski, Michal Dedic, Emil Pérez, Maria Escura Cléry, Antoine Campagne, Sébastien Uldry, Anne-Christine Braga, Sophie Heller, Manfred Rabl, Julius Afanasyev, Pavel Boehringer, Daniel Nováček, Jiří Allain, Frédéric T Mühlemann, Oliver Nucleic Acids Res Molecular Biology Heterogenous nuclear ribonucleoproteins (hnRNPs) are abundant proteins implicated in various steps of RNA processing that assemble on nuclear RNA into larger complexes termed 40S hnRNP particles. Despite their initial discovery 55 years ago, our understanding of these intriguing macromolecular assemblies remains limited. Here, we report the biochemical purification of native 40S hnRNP particles and the determination of their complete protein composition by label-free quantitative mass spectrometry, identifying A-group and C-group hnRNPs as the major protein constituents. Isolated 40S hnRNP particles dissociate upon RNA digestion and can be reconstituted in vitro on defined RNAs in the presence of the individual protein components, demonstrating a scaffolding role for RNA in nucleating particle formation. Finally, we revealed their nanometer scale, condensate-like nature, promoted by intrinsically disordered regions of A-group hnRNPs. Collectively, we identify nuclear 40S hnRNP particles as novel dynamic biomolecular condensates. Oxford University Press 2022-06-10 /pmc/articles/PMC9226511/ /pubmed/35687109 http://dx.doi.org/10.1093/nar/gkac457 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Molecular Biology Domanski, Michal Dedic, Emil Pérez, Maria Escura Cléry, Antoine Campagne, Sébastien Uldry, Anne-Christine Braga, Sophie Heller, Manfred Rabl, Julius Afanasyev, Pavel Boehringer, Daniel Nováček, Jiří Allain, Frédéric T Mühlemann, Oliver 40S hnRNP particles are a novel class of nuclear biomolecular condensates |
title | 40S hnRNP particles are a novel class of nuclear biomolecular condensates |
title_full | 40S hnRNP particles are a novel class of nuclear biomolecular condensates |
title_fullStr | 40S hnRNP particles are a novel class of nuclear biomolecular condensates |
title_full_unstemmed | 40S hnRNP particles are a novel class of nuclear biomolecular condensates |
title_short | 40S hnRNP particles are a novel class of nuclear biomolecular condensates |
title_sort | 40s hnrnp particles are a novel class of nuclear biomolecular condensates |
topic | Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9226511/ https://www.ncbi.nlm.nih.gov/pubmed/35687109 http://dx.doi.org/10.1093/nar/gkac457 |
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