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Efficient and Highly Accurate Diagnosis of Malignant Hematological Diseases Based on Whole-Slide Images Using Deep Learning
Hematopoietic disorders are serious diseases that threaten human health, and the diagnosis of these diseases is essential for treatment. However, traditional diagnosis methods rely on manual operation, which is time consuming and laborious, and examining entire slide is challenging. In this study, w...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9226668/ https://www.ncbi.nlm.nih.gov/pubmed/35756613 http://dx.doi.org/10.3389/fonc.2022.879308 |
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author | Wang, Chong Wei, Xiu-Li Li, Chen-Xi Wang, Yang-Zhen Wu, Yang Niu, Yan-Xiang Zhang, Chen Yu, Yi |
author_facet | Wang, Chong Wei, Xiu-Li Li, Chen-Xi Wang, Yang-Zhen Wu, Yang Niu, Yan-Xiang Zhang, Chen Yu, Yi |
author_sort | Wang, Chong |
collection | PubMed |
description | Hematopoietic disorders are serious diseases that threaten human health, and the diagnosis of these diseases is essential for treatment. However, traditional diagnosis methods rely on manual operation, which is time consuming and laborious, and examining entire slide is challenging. In this study, we developed a weakly supervised deep learning method for diagnosing malignant hematological diseases requiring only slide-level labels. The method improves efficiency by converting whole-slide image (WSI) patches into low-dimensional feature representations. Then the patch-level features of each WSI are aggregated into slide-level representations by an attention-based network. The model provides final diagnostic predictions based on these slide-level representations. By applying the proposed model to our collection of bone marrow WSIs at different magnifications, we found that an area under the receiver operating characteristic curve of 0.966 on an independent test set can be obtained at 10× magnification. Moreover, the performance on microscopy images can achieve an average accuracy of 94.2% on two publicly available datasets. In conclusion, we have developed a novel method that can achieve fast and accurate diagnosis in different scenarios of hematological disorders. |
format | Online Article Text |
id | pubmed-9226668 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92266682022-06-25 Efficient and Highly Accurate Diagnosis of Malignant Hematological Diseases Based on Whole-Slide Images Using Deep Learning Wang, Chong Wei, Xiu-Li Li, Chen-Xi Wang, Yang-Zhen Wu, Yang Niu, Yan-Xiang Zhang, Chen Yu, Yi Front Oncol Oncology Hematopoietic disorders are serious diseases that threaten human health, and the diagnosis of these diseases is essential for treatment. However, traditional diagnosis methods rely on manual operation, which is time consuming and laborious, and examining entire slide is challenging. In this study, we developed a weakly supervised deep learning method for diagnosing malignant hematological diseases requiring only slide-level labels. The method improves efficiency by converting whole-slide image (WSI) patches into low-dimensional feature representations. Then the patch-level features of each WSI are aggregated into slide-level representations by an attention-based network. The model provides final diagnostic predictions based on these slide-level representations. By applying the proposed model to our collection of bone marrow WSIs at different magnifications, we found that an area under the receiver operating characteristic curve of 0.966 on an independent test set can be obtained at 10× magnification. Moreover, the performance on microscopy images can achieve an average accuracy of 94.2% on two publicly available datasets. In conclusion, we have developed a novel method that can achieve fast and accurate diagnosis in different scenarios of hematological disorders. Frontiers Media S.A. 2022-06-10 /pmc/articles/PMC9226668/ /pubmed/35756613 http://dx.doi.org/10.3389/fonc.2022.879308 Text en Copyright © 2022 Wang, Wei, Li, Wang, Wu, Niu, Zhang and Yu https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Wang, Chong Wei, Xiu-Li Li, Chen-Xi Wang, Yang-Zhen Wu, Yang Niu, Yan-Xiang Zhang, Chen Yu, Yi Efficient and Highly Accurate Diagnosis of Malignant Hematological Diseases Based on Whole-Slide Images Using Deep Learning |
title | Efficient and Highly Accurate Diagnosis of Malignant Hematological Diseases Based on Whole-Slide Images Using Deep Learning |
title_full | Efficient and Highly Accurate Diagnosis of Malignant Hematological Diseases Based on Whole-Slide Images Using Deep Learning |
title_fullStr | Efficient and Highly Accurate Diagnosis of Malignant Hematological Diseases Based on Whole-Slide Images Using Deep Learning |
title_full_unstemmed | Efficient and Highly Accurate Diagnosis of Malignant Hematological Diseases Based on Whole-Slide Images Using Deep Learning |
title_short | Efficient and Highly Accurate Diagnosis of Malignant Hematological Diseases Based on Whole-Slide Images Using Deep Learning |
title_sort | efficient and highly accurate diagnosis of malignant hematological diseases based on whole-slide images using deep learning |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9226668/ https://www.ncbi.nlm.nih.gov/pubmed/35756613 http://dx.doi.org/10.3389/fonc.2022.879308 |
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