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AddictedChem: A Data-Driven Integrated Platform for New Psychoactive Substance Identification
The mechanisms underlying drug addiction remain nebulous. Furthermore, new psychoactive substances (NPS) are being developed to circumvent legal control; hence, rapid NPS identification is urgently needed. Here, we present the construction of the comprehensive database of controlled substances, Addi...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9227411/ https://www.ncbi.nlm.nih.gov/pubmed/35745053 http://dx.doi.org/10.3390/molecules27123931 |
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author | Han, Mengying Liu, Sheng Zhang, Dachuan Zhang, Rui Liu, Dongliang Xing, Huadong Sun, Dandan Gong, Linlin Cai, Pengli Tu, Weizhong Chen, Junni Hu, Qian-Nan |
author_facet | Han, Mengying Liu, Sheng Zhang, Dachuan Zhang, Rui Liu, Dongliang Xing, Huadong Sun, Dandan Gong, Linlin Cai, Pengli Tu, Weizhong Chen, Junni Hu, Qian-Nan |
author_sort | Han, Mengying |
collection | PubMed |
description | The mechanisms underlying drug addiction remain nebulous. Furthermore, new psychoactive substances (NPS) are being developed to circumvent legal control; hence, rapid NPS identification is urgently needed. Here, we present the construction of the comprehensive database of controlled substances, AddictedChem. This database integrates the following information on controlled substances from the US Drug Enforcement Administration: physical and chemical characteristics; classified literature by Medical Subject Headings terms and target binding data; absorption, distribution, metabolism, excretion, and toxicity; and related genes, pathways, and bioassays. We created 29 predictive models for NPS identification using five machine learning algorithms and seven molecular descriptors. The best performing models achieved a balanced accuracy (BA) of 0.940 with an area under the curve (AUC) of 0.986 for the test set and a BA of 0.919 and an AUC of 0.968 for the external validation set, which were subsequently used to identify potential NPS with a consensus strategy. Concurrently, a chemical space that included the properties of vectorised addictive compounds was constructed and integrated with AddictedChem, illustrating the principle of diversely existing NPS from a macro perspective. Based on these potential applications, AddictedChem could be considered a highly promising tool for NPS identification and evaluation. |
format | Online Article Text |
id | pubmed-9227411 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-92274112022-06-25 AddictedChem: A Data-Driven Integrated Platform for New Psychoactive Substance Identification Han, Mengying Liu, Sheng Zhang, Dachuan Zhang, Rui Liu, Dongliang Xing, Huadong Sun, Dandan Gong, Linlin Cai, Pengli Tu, Weizhong Chen, Junni Hu, Qian-Nan Molecules Article The mechanisms underlying drug addiction remain nebulous. Furthermore, new psychoactive substances (NPS) are being developed to circumvent legal control; hence, rapid NPS identification is urgently needed. Here, we present the construction of the comprehensive database of controlled substances, AddictedChem. This database integrates the following information on controlled substances from the US Drug Enforcement Administration: physical and chemical characteristics; classified literature by Medical Subject Headings terms and target binding data; absorption, distribution, metabolism, excretion, and toxicity; and related genes, pathways, and bioassays. We created 29 predictive models for NPS identification using five machine learning algorithms and seven molecular descriptors. The best performing models achieved a balanced accuracy (BA) of 0.940 with an area under the curve (AUC) of 0.986 for the test set and a BA of 0.919 and an AUC of 0.968 for the external validation set, which were subsequently used to identify potential NPS with a consensus strategy. Concurrently, a chemical space that included the properties of vectorised addictive compounds was constructed and integrated with AddictedChem, illustrating the principle of diversely existing NPS from a macro perspective. Based on these potential applications, AddictedChem could be considered a highly promising tool for NPS identification and evaluation. MDPI 2022-06-19 /pmc/articles/PMC9227411/ /pubmed/35745053 http://dx.doi.org/10.3390/molecules27123931 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Han, Mengying Liu, Sheng Zhang, Dachuan Zhang, Rui Liu, Dongliang Xing, Huadong Sun, Dandan Gong, Linlin Cai, Pengli Tu, Weizhong Chen, Junni Hu, Qian-Nan AddictedChem: A Data-Driven Integrated Platform for New Psychoactive Substance Identification |
title | AddictedChem: A Data-Driven Integrated Platform for New Psychoactive Substance Identification |
title_full | AddictedChem: A Data-Driven Integrated Platform for New Psychoactive Substance Identification |
title_fullStr | AddictedChem: A Data-Driven Integrated Platform for New Psychoactive Substance Identification |
title_full_unstemmed | AddictedChem: A Data-Driven Integrated Platform for New Psychoactive Substance Identification |
title_short | AddictedChem: A Data-Driven Integrated Platform for New Psychoactive Substance Identification |
title_sort | addictedchem: a data-driven integrated platform for new psychoactive substance identification |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9227411/ https://www.ncbi.nlm.nih.gov/pubmed/35745053 http://dx.doi.org/10.3390/molecules27123931 |
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