Cargando…

Secondary Metabolites and Biosynthetic Gene Clusters Analysis of Deep-Sea Hydrothermal Vent-Derived Streptomyces sp. SCSIO ZS0520

Streptomyces sp. SCSIO ZS0520 is a deep-sea hydrothermal vent-derived actinomycete. Our previous metabolism investigation showed that Streptomyces sp. SCSIO ZS0520 is a producer of cytotoxic actinopyrones. Here, another four types of secondary metabolites were identified, including six salinomycin i...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Huaran, Chen, Yingying, Li, Yanqing, Song, Yongxiang, Ma, Junying, Ju, Jianhua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9228677/
https://www.ncbi.nlm.nih.gov/pubmed/35736196
http://dx.doi.org/10.3390/md20060393
_version_ 1784734540438175744
author Zhang, Huaran
Chen, Yingying
Li, Yanqing
Song, Yongxiang
Ma, Junying
Ju, Jianhua
author_facet Zhang, Huaran
Chen, Yingying
Li, Yanqing
Song, Yongxiang
Ma, Junying
Ju, Jianhua
author_sort Zhang, Huaran
collection PubMed
description Streptomyces sp. SCSIO ZS0520 is a deep-sea hydrothermal vent-derived actinomycete. Our previous metabolism investigation showed that Streptomyces sp. SCSIO ZS0520 is a producer of cytotoxic actinopyrones. Here, another four types of secondary metabolites were identified, including six salinomycin isomers (2–7), the macrolide elaiophylin (8), the triterpene N-acetyl-aminobacteriohopanetriol (9), and the pyrone minipyrone (10). Among them, compounds 2–6 and 10 are new compounds. To understand the biosynthetic pathway of these compounds, a bioinformatic analysis of the whole genome was carried out, which identified 34 secondary metabolite biosynthetic gene clusters. Next, the biosynthetic pathways responsive to four types of products were deduced on the basis of gene function predictions and structure information. Taken together, these findings prove the metabolite potential of ZS0520 and lay the foundations to solve the remaining biosynthetic issues in four types of marine natural products.
format Online
Article
Text
id pubmed-9228677
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-92286772022-06-25 Secondary Metabolites and Biosynthetic Gene Clusters Analysis of Deep-Sea Hydrothermal Vent-Derived Streptomyces sp. SCSIO ZS0520 Zhang, Huaran Chen, Yingying Li, Yanqing Song, Yongxiang Ma, Junying Ju, Jianhua Mar Drugs Article Streptomyces sp. SCSIO ZS0520 is a deep-sea hydrothermal vent-derived actinomycete. Our previous metabolism investigation showed that Streptomyces sp. SCSIO ZS0520 is a producer of cytotoxic actinopyrones. Here, another four types of secondary metabolites were identified, including six salinomycin isomers (2–7), the macrolide elaiophylin (8), the triterpene N-acetyl-aminobacteriohopanetriol (9), and the pyrone minipyrone (10). Among them, compounds 2–6 and 10 are new compounds. To understand the biosynthetic pathway of these compounds, a bioinformatic analysis of the whole genome was carried out, which identified 34 secondary metabolite biosynthetic gene clusters. Next, the biosynthetic pathways responsive to four types of products were deduced on the basis of gene function predictions and structure information. Taken together, these findings prove the metabolite potential of ZS0520 and lay the foundations to solve the remaining biosynthetic issues in four types of marine natural products. MDPI 2022-06-14 /pmc/articles/PMC9228677/ /pubmed/35736196 http://dx.doi.org/10.3390/md20060393 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhang, Huaran
Chen, Yingying
Li, Yanqing
Song, Yongxiang
Ma, Junying
Ju, Jianhua
Secondary Metabolites and Biosynthetic Gene Clusters Analysis of Deep-Sea Hydrothermal Vent-Derived Streptomyces sp. SCSIO ZS0520
title Secondary Metabolites and Biosynthetic Gene Clusters Analysis of Deep-Sea Hydrothermal Vent-Derived Streptomyces sp. SCSIO ZS0520
title_full Secondary Metabolites and Biosynthetic Gene Clusters Analysis of Deep-Sea Hydrothermal Vent-Derived Streptomyces sp. SCSIO ZS0520
title_fullStr Secondary Metabolites and Biosynthetic Gene Clusters Analysis of Deep-Sea Hydrothermal Vent-Derived Streptomyces sp. SCSIO ZS0520
title_full_unstemmed Secondary Metabolites and Biosynthetic Gene Clusters Analysis of Deep-Sea Hydrothermal Vent-Derived Streptomyces sp. SCSIO ZS0520
title_short Secondary Metabolites and Biosynthetic Gene Clusters Analysis of Deep-Sea Hydrothermal Vent-Derived Streptomyces sp. SCSIO ZS0520
title_sort secondary metabolites and biosynthetic gene clusters analysis of deep-sea hydrothermal vent-derived streptomyces sp. scsio zs0520
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9228677/
https://www.ncbi.nlm.nih.gov/pubmed/35736196
http://dx.doi.org/10.3390/md20060393
work_keys_str_mv AT zhanghuaran secondarymetabolitesandbiosyntheticgeneclustersanalysisofdeepseahydrothermalventderivedstreptomycesspscsiozs0520
AT chenyingying secondarymetabolitesandbiosyntheticgeneclustersanalysisofdeepseahydrothermalventderivedstreptomycesspscsiozs0520
AT liyanqing secondarymetabolitesandbiosyntheticgeneclustersanalysisofdeepseahydrothermalventderivedstreptomycesspscsiozs0520
AT songyongxiang secondarymetabolitesandbiosyntheticgeneclustersanalysisofdeepseahydrothermalventderivedstreptomycesspscsiozs0520
AT majunying secondarymetabolitesandbiosyntheticgeneclustersanalysisofdeepseahydrothermalventderivedstreptomycesspscsiozs0520
AT jujianhua secondarymetabolitesandbiosyntheticgeneclustersanalysisofdeepseahydrothermalventderivedstreptomycesspscsiozs0520