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How to Catch the Ball: Fullerene Binding to the Corannulene Pincer
The corannulene pincer (also known in the literature as the buckycatcher) is a fascinating system that may encapsulate, among other molecules, the [Formula: see text] and [Formula: see text] fullerenes. These complexes are held together by strong π-stacking interactions. Although these are quantum m...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9228874/ https://www.ncbi.nlm.nih.gov/pubmed/35744963 http://dx.doi.org/10.3390/molecules27123838 |
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author | Menezes, Filipe Popowicz, Grzegorz Maria |
author_facet | Menezes, Filipe Popowicz, Grzegorz Maria |
author_sort | Menezes, Filipe |
collection | PubMed |
description | The corannulene pincer (also known in the literature as the buckycatcher) is a fascinating system that may encapsulate, among other molecules, the [Formula: see text] and [Formula: see text] fullerenes. These complexes are held together by strong π-stacking interactions. Although these are quantum mechanical effects, their description by quantum chemical methods has proved very hard. We used three semi-empirical methods, PM6-D3H4X, PM6-D3H+ and GFN2-xTB, to model the interactions. Binding to fullerenes was extended to all open conformations of the buckycatcher, and with the proper choice of solvation model and partition functions, we obtained Gibbs free energies of binding that deviated by 1.0–1.5 kcal/mol from the experimental data. Adding three-body dispersion to PM6-D3H+ led to even better agreement. These results agree better with the experimental data than calculations using higher-level methods at a significantly lower fraction of the computational cost. Furthermore, the formation of adducts with [Formula: see text] was studied using dynamical simulations, which helped to build a more complete picture of the behavior of the corannulene pincer with fullerenes. We also investigated the use of exchange-binding models to recover more information on this system in solution. Though the final Gibbs free energies in solution were worsened, gas-phase enthalpies and entropies better mirrored the experimental data. |
format | Online Article Text |
id | pubmed-9228874 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-92288742022-06-25 How to Catch the Ball: Fullerene Binding to the Corannulene Pincer Menezes, Filipe Popowicz, Grzegorz Maria Molecules Article The corannulene pincer (also known in the literature as the buckycatcher) is a fascinating system that may encapsulate, among other molecules, the [Formula: see text] and [Formula: see text] fullerenes. These complexes are held together by strong π-stacking interactions. Although these are quantum mechanical effects, their description by quantum chemical methods has proved very hard. We used three semi-empirical methods, PM6-D3H4X, PM6-D3H+ and GFN2-xTB, to model the interactions. Binding to fullerenes was extended to all open conformations of the buckycatcher, and with the proper choice of solvation model and partition functions, we obtained Gibbs free energies of binding that deviated by 1.0–1.5 kcal/mol from the experimental data. Adding three-body dispersion to PM6-D3H+ led to even better agreement. These results agree better with the experimental data than calculations using higher-level methods at a significantly lower fraction of the computational cost. Furthermore, the formation of adducts with [Formula: see text] was studied using dynamical simulations, which helped to build a more complete picture of the behavior of the corannulene pincer with fullerenes. We also investigated the use of exchange-binding models to recover more information on this system in solution. Though the final Gibbs free energies in solution were worsened, gas-phase enthalpies and entropies better mirrored the experimental data. MDPI 2022-06-15 /pmc/articles/PMC9228874/ /pubmed/35744963 http://dx.doi.org/10.3390/molecules27123838 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Menezes, Filipe Popowicz, Grzegorz Maria How to Catch the Ball: Fullerene Binding to the Corannulene Pincer |
title | How to Catch the Ball: Fullerene Binding to the Corannulene Pincer |
title_full | How to Catch the Ball: Fullerene Binding to the Corannulene Pincer |
title_fullStr | How to Catch the Ball: Fullerene Binding to the Corannulene Pincer |
title_full_unstemmed | How to Catch the Ball: Fullerene Binding to the Corannulene Pincer |
title_short | How to Catch the Ball: Fullerene Binding to the Corannulene Pincer |
title_sort | how to catch the ball: fullerene binding to the corannulene pincer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9228874/ https://www.ncbi.nlm.nih.gov/pubmed/35744963 http://dx.doi.org/10.3390/molecules27123838 |
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