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Orally efficacious lead of the AVG inhibitor series targeting a dynamic interface in the respiratory syncytial virus polymerase

Respiratory syncytial virus (RSV) is a leading cause of lower respiratory infections in infants and the immunocompromised, yet no efficient therapeutic exists. We have identified the AVG class of allosteric inhibitors of RSV RNA synthesis. Here, we demonstrate through biolayer interferometry and in...

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Autores principales: Sourimant, Julien, Lieber, Carolin M., Yoon, Jeong-Joong, Toots, Mart, Govindarajan, Mugunthan, Udumula, Venkata, Sakamoto, Kaori, Natchus, Michael G., Patti, Joseph, Vernachio, John, Plemper, Richard K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9232112/
https://www.ncbi.nlm.nih.gov/pubmed/35749502
http://dx.doi.org/10.1126/sciadv.abo2236
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author Sourimant, Julien
Lieber, Carolin M.
Yoon, Jeong-Joong
Toots, Mart
Govindarajan, Mugunthan
Udumula, Venkata
Sakamoto, Kaori
Natchus, Michael G.
Patti, Joseph
Vernachio, John
Plemper, Richard K.
author_facet Sourimant, Julien
Lieber, Carolin M.
Yoon, Jeong-Joong
Toots, Mart
Govindarajan, Mugunthan
Udumula, Venkata
Sakamoto, Kaori
Natchus, Michael G.
Patti, Joseph
Vernachio, John
Plemper, Richard K.
author_sort Sourimant, Julien
collection PubMed
description Respiratory syncytial virus (RSV) is a leading cause of lower respiratory infections in infants and the immunocompromised, yet no efficient therapeutic exists. We have identified the AVG class of allosteric inhibitors of RSV RNA synthesis. Here, we demonstrate through biolayer interferometry and in vitro RNA-dependent RNA polymerase (RdRP) assays that AVG compounds bind to the viral polymerase, stalling the polymerase in initiation conformation. Resistance profiling revealed a unique escape pattern, suggesting a discrete docking pose. Affinity mapping using photoreactive AVG analogs identified the interface of polymerase core, capping, and connector domains as a molecular target site. A first-generation lead showed nanomolar potency against RSV in human airway epithelium organoids but lacked in vivo efficacy. Docking pose-informed synthetic optimization generated orally efficacious AVG-388, which showed potent efficacy in the RSV mouse model when administered therapeutically. This study maps a druggable target in the RSV RdRP and establishes clinical potential of the AVG chemotype against RSV disease.
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spelling pubmed-92321122022-07-08 Orally efficacious lead of the AVG inhibitor series targeting a dynamic interface in the respiratory syncytial virus polymerase Sourimant, Julien Lieber, Carolin M. Yoon, Jeong-Joong Toots, Mart Govindarajan, Mugunthan Udumula, Venkata Sakamoto, Kaori Natchus, Michael G. Patti, Joseph Vernachio, John Plemper, Richard K. Sci Adv Biomedicine and Life Sciences Respiratory syncytial virus (RSV) is a leading cause of lower respiratory infections in infants and the immunocompromised, yet no efficient therapeutic exists. We have identified the AVG class of allosteric inhibitors of RSV RNA synthesis. Here, we demonstrate through biolayer interferometry and in vitro RNA-dependent RNA polymerase (RdRP) assays that AVG compounds bind to the viral polymerase, stalling the polymerase in initiation conformation. Resistance profiling revealed a unique escape pattern, suggesting a discrete docking pose. Affinity mapping using photoreactive AVG analogs identified the interface of polymerase core, capping, and connector domains as a molecular target site. A first-generation lead showed nanomolar potency against RSV in human airway epithelium organoids but lacked in vivo efficacy. Docking pose-informed synthetic optimization generated orally efficacious AVG-388, which showed potent efficacy in the RSV mouse model when administered therapeutically. This study maps a druggable target in the RSV RdRP and establishes clinical potential of the AVG chemotype against RSV disease. American Association for the Advancement of Science 2022-06-24 /pmc/articles/PMC9232112/ /pubmed/35749502 http://dx.doi.org/10.1126/sciadv.abo2236 Text en Copyright © 2022 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC). https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license (https://creativecommons.org/licenses/by-nc/4.0/) , which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited.
spellingShingle Biomedicine and Life Sciences
Sourimant, Julien
Lieber, Carolin M.
Yoon, Jeong-Joong
Toots, Mart
Govindarajan, Mugunthan
Udumula, Venkata
Sakamoto, Kaori
Natchus, Michael G.
Patti, Joseph
Vernachio, John
Plemper, Richard K.
Orally efficacious lead of the AVG inhibitor series targeting a dynamic interface in the respiratory syncytial virus polymerase
title Orally efficacious lead of the AVG inhibitor series targeting a dynamic interface in the respiratory syncytial virus polymerase
title_full Orally efficacious lead of the AVG inhibitor series targeting a dynamic interface in the respiratory syncytial virus polymerase
title_fullStr Orally efficacious lead of the AVG inhibitor series targeting a dynamic interface in the respiratory syncytial virus polymerase
title_full_unstemmed Orally efficacious lead of the AVG inhibitor series targeting a dynamic interface in the respiratory syncytial virus polymerase
title_short Orally efficacious lead of the AVG inhibitor series targeting a dynamic interface in the respiratory syncytial virus polymerase
title_sort orally efficacious lead of the avg inhibitor series targeting a dynamic interface in the respiratory syncytial virus polymerase
topic Biomedicine and Life Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9232112/
https://www.ncbi.nlm.nih.gov/pubmed/35749502
http://dx.doi.org/10.1126/sciadv.abo2236
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