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Automatic symptoms identification from a massive volume of unstructured medical consultations using deep neural and BERT models

Automatic symptom identification plays a crucial role in assisting doctors during the diagnosis process in Telemedicine. In general, physicians spend considerable time on clinical documentation and symptom identification, which is unfeasible due to their full schedule. With text-based consultation s...

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Detalles Bibliográficos
Autores principales: Faris, Hossam, Faris, Mohammad, Habib, Maria, Alomari, Alaa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9233221/
https://www.ncbi.nlm.nih.gov/pubmed/35761935
http://dx.doi.org/10.1016/j.heliyon.2022.e09683
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author Faris, Hossam
Faris, Mohammad
Habib, Maria
Alomari, Alaa
author_facet Faris, Hossam
Faris, Mohammad
Habib, Maria
Alomari, Alaa
author_sort Faris, Hossam
collection PubMed
description Automatic symptom identification plays a crucial role in assisting doctors during the diagnosis process in Telemedicine. In general, physicians spend considerable time on clinical documentation and symptom identification, which is unfeasible due to their full schedule. With text-based consultation services in telemedicine, the identification of symptoms from a user's consultation is a sophisticated process and time-consuming. Moreover, at Altibbi, which is an Arabic telemedicine platform and the context of this work, users consult doctors and describe their conditions in different Arabic dialects which makes the problem more complex and challenging. Therefore, in this work, an advanced deep learning approach is developed consultations with multi-dialects. The approach is formulated as a multi-label multi-class classification using features extracted based on AraBERT and fine-tuned on the bidirectional long short-term memory (BiLSTM) network. The Fine-tuning of BiLSTM relies on features engineered based on different variants of the bidirectional encoder representations from transformers (BERT). Evaluating the models based on precision, recall, and a customized hit rate showed a successful identification of symptoms from Arabic texts with promising accuracy. Hence, this paves the way toward deploying an automated symptom identification model in production at Altibbi which can help general practitioners in telemedicine in providing more efficient and accurate consultations.
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spelling pubmed-92332212022-06-26 Automatic symptoms identification from a massive volume of unstructured medical consultations using deep neural and BERT models Faris, Hossam Faris, Mohammad Habib, Maria Alomari, Alaa Heliyon Research Article Automatic symptom identification plays a crucial role in assisting doctors during the diagnosis process in Telemedicine. In general, physicians spend considerable time on clinical documentation and symptom identification, which is unfeasible due to their full schedule. With text-based consultation services in telemedicine, the identification of symptoms from a user's consultation is a sophisticated process and time-consuming. Moreover, at Altibbi, which is an Arabic telemedicine platform and the context of this work, users consult doctors and describe their conditions in different Arabic dialects which makes the problem more complex and challenging. Therefore, in this work, an advanced deep learning approach is developed consultations with multi-dialects. The approach is formulated as a multi-label multi-class classification using features extracted based on AraBERT and fine-tuned on the bidirectional long short-term memory (BiLSTM) network. The Fine-tuning of BiLSTM relies on features engineered based on different variants of the bidirectional encoder representations from transformers (BERT). Evaluating the models based on precision, recall, and a customized hit rate showed a successful identification of symptoms from Arabic texts with promising accuracy. Hence, this paves the way toward deploying an automated symptom identification model in production at Altibbi which can help general practitioners in telemedicine in providing more efficient and accurate consultations. Elsevier 2022-06-10 /pmc/articles/PMC9233221/ /pubmed/35761935 http://dx.doi.org/10.1016/j.heliyon.2022.e09683 Text en © 2022 Altibbi https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Faris, Hossam
Faris, Mohammad
Habib, Maria
Alomari, Alaa
Automatic symptoms identification from a massive volume of unstructured medical consultations using deep neural and BERT models
title Automatic symptoms identification from a massive volume of unstructured medical consultations using deep neural and BERT models
title_full Automatic symptoms identification from a massive volume of unstructured medical consultations using deep neural and BERT models
title_fullStr Automatic symptoms identification from a massive volume of unstructured medical consultations using deep neural and BERT models
title_full_unstemmed Automatic symptoms identification from a massive volume of unstructured medical consultations using deep neural and BERT models
title_short Automatic symptoms identification from a massive volume of unstructured medical consultations using deep neural and BERT models
title_sort automatic symptoms identification from a massive volume of unstructured medical consultations using deep neural and bert models
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9233221/
https://www.ncbi.nlm.nih.gov/pubmed/35761935
http://dx.doi.org/10.1016/j.heliyon.2022.e09683
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