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Comprehensive analysis of the novel omicron receptor AXL in cancers
The SARS-CoV-2 is constantly mutating, and the new coronavirus such as Omicron has spread to many countries around the world. Anexelekto (AXL) is a transmembrane protein with biological functions such as promoting cell growth, migration, aggregation, metastasis and adhesion, and plays an important r...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Research Network of Computational and Structural Biotechnology
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9234055/ https://www.ncbi.nlm.nih.gov/pubmed/35782741 http://dx.doi.org/10.1016/j.csbj.2022.06.051 |
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author | Zhang, Wei-Na Li, Xue-Ping Wang, Peng-Fei Zhu, Lu Xiao, Xin-Hua Dai, Yu-Jun |
author_facet | Zhang, Wei-Na Li, Xue-Ping Wang, Peng-Fei Zhu, Lu Xiao, Xin-Hua Dai, Yu-Jun |
author_sort | Zhang, Wei-Na |
collection | PubMed |
description | The SARS-CoV-2 is constantly mutating, and the new coronavirus such as Omicron has spread to many countries around the world. Anexelekto (AXL) is a transmembrane protein with biological functions such as promoting cell growth, migration, aggregation, metastasis and adhesion, and plays an important role in cancers and coronavirus disease 2019 (COVID-19). Unlike angiotensin-converting enzyme 2 (ACE2), AXL was highly expressed in respiratory system cells. In this study, we verified the AXL expression in cancer and normal tissues and found AXL expression was strongly correlated with cancer prognosis, tumor mutation burden (TMB), the microsatellite instability (MSI) in most tumor types. Immune infiltration analysis also demonstrated that there was an inextricable link between AXL expression and immune scores in cancer patients, especially in BLCA, BRCA and CESC. The NK-cells, plasmacytoid dendritic cells, myeloid dendritic cells, as one of the important components of the tumor microenvironment, were highly expressed AXL. In addition, AXL-related tumor neoantigens were identified and might provide the novel potential targets for tumor vaccines or SARS-Cov-2 vaccines research in cancer patients. |
format | Online Article Text |
id | pubmed-9234055 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Research Network of Computational and Structural Biotechnology |
record_format | MEDLINE/PubMed |
spelling | pubmed-92340552022-06-27 Comprehensive analysis of the novel omicron receptor AXL in cancers Zhang, Wei-Na Li, Xue-Ping Wang, Peng-Fei Zhu, Lu Xiao, Xin-Hua Dai, Yu-Jun Comput Struct Biotechnol J Research Article The SARS-CoV-2 is constantly mutating, and the new coronavirus such as Omicron has spread to many countries around the world. Anexelekto (AXL) is a transmembrane protein with biological functions such as promoting cell growth, migration, aggregation, metastasis and adhesion, and plays an important role in cancers and coronavirus disease 2019 (COVID-19). Unlike angiotensin-converting enzyme 2 (ACE2), AXL was highly expressed in respiratory system cells. In this study, we verified the AXL expression in cancer and normal tissues and found AXL expression was strongly correlated with cancer prognosis, tumor mutation burden (TMB), the microsatellite instability (MSI) in most tumor types. Immune infiltration analysis also demonstrated that there was an inextricable link between AXL expression and immune scores in cancer patients, especially in BLCA, BRCA and CESC. The NK-cells, plasmacytoid dendritic cells, myeloid dendritic cells, as one of the important components of the tumor microenvironment, were highly expressed AXL. In addition, AXL-related tumor neoantigens were identified and might provide the novel potential targets for tumor vaccines or SARS-Cov-2 vaccines research in cancer patients. Research Network of Computational and Structural Biotechnology 2022-06-27 /pmc/articles/PMC9234055/ /pubmed/35782741 http://dx.doi.org/10.1016/j.csbj.2022.06.051 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Research Article Zhang, Wei-Na Li, Xue-Ping Wang, Peng-Fei Zhu, Lu Xiao, Xin-Hua Dai, Yu-Jun Comprehensive analysis of the novel omicron receptor AXL in cancers |
title | Comprehensive analysis of the novel omicron receptor AXL in cancers |
title_full | Comprehensive analysis of the novel omicron receptor AXL in cancers |
title_fullStr | Comprehensive analysis of the novel omicron receptor AXL in cancers |
title_full_unstemmed | Comprehensive analysis of the novel omicron receptor AXL in cancers |
title_short | Comprehensive analysis of the novel omicron receptor AXL in cancers |
title_sort | comprehensive analysis of the novel omicron receptor axl in cancers |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9234055/ https://www.ncbi.nlm.nih.gov/pubmed/35782741 http://dx.doi.org/10.1016/j.csbj.2022.06.051 |
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