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Functional Micropeptides Encoded by Long Non-Coding RNAs: A Comprehensive Review

Long non-coding RNAs (lncRNAs) were originally defined as non-coding RNAs (ncRNAs) which lack protein-coding ability. However, with the emergence of technologies such as ribosome profiling sequencing and ribosome-nascent chain complex sequencing, it has been demonstrated that most lncRNAs have short...

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Autores principales: Pan, Jianfeng, Wang, Ruijun, Shang, Fangzheng, Ma, Rong, Rong, Youjun, Zhang, Yanjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9234465/
https://www.ncbi.nlm.nih.gov/pubmed/35769907
http://dx.doi.org/10.3389/fmolb.2022.817517
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author Pan, Jianfeng
Wang, Ruijun
Shang, Fangzheng
Ma, Rong
Rong, Youjun
Zhang, Yanjun
author_facet Pan, Jianfeng
Wang, Ruijun
Shang, Fangzheng
Ma, Rong
Rong, Youjun
Zhang, Yanjun
author_sort Pan, Jianfeng
collection PubMed
description Long non-coding RNAs (lncRNAs) were originally defined as non-coding RNAs (ncRNAs) which lack protein-coding ability. However, with the emergence of technologies such as ribosome profiling sequencing and ribosome-nascent chain complex sequencing, it has been demonstrated that most lncRNAs have short open reading frames hence the potential to encode functional micropeptides. Such micropeptides have been described to be widely involved in life-sustaining activities in several organisms, such as homeostasis regulation, disease, and tumor occurrence, and development, and morphological development of animals, and plants. In this review, we focus on the latest developments in the field of lncRNA-encoded micropeptides, and describe the relevant computational tools and techniques for micropeptide prediction and identification. This review aims to serve as a reference for future research studies on lncRNA-encoded micropeptides.
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spelling pubmed-92344652022-06-28 Functional Micropeptides Encoded by Long Non-Coding RNAs: A Comprehensive Review Pan, Jianfeng Wang, Ruijun Shang, Fangzheng Ma, Rong Rong, Youjun Zhang, Yanjun Front Mol Biosci Molecular Biosciences Long non-coding RNAs (lncRNAs) were originally defined as non-coding RNAs (ncRNAs) which lack protein-coding ability. However, with the emergence of technologies such as ribosome profiling sequencing and ribosome-nascent chain complex sequencing, it has been demonstrated that most lncRNAs have short open reading frames hence the potential to encode functional micropeptides. Such micropeptides have been described to be widely involved in life-sustaining activities in several organisms, such as homeostasis regulation, disease, and tumor occurrence, and development, and morphological development of animals, and plants. In this review, we focus on the latest developments in the field of lncRNA-encoded micropeptides, and describe the relevant computational tools and techniques for micropeptide prediction and identification. This review aims to serve as a reference for future research studies on lncRNA-encoded micropeptides. Frontiers Media S.A. 2022-06-13 /pmc/articles/PMC9234465/ /pubmed/35769907 http://dx.doi.org/10.3389/fmolb.2022.817517 Text en Copyright © 2022 Pan, Wang, Shang, Ma, Rong and Zhang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Molecular Biosciences
Pan, Jianfeng
Wang, Ruijun
Shang, Fangzheng
Ma, Rong
Rong, Youjun
Zhang, Yanjun
Functional Micropeptides Encoded by Long Non-Coding RNAs: A Comprehensive Review
title Functional Micropeptides Encoded by Long Non-Coding RNAs: A Comprehensive Review
title_full Functional Micropeptides Encoded by Long Non-Coding RNAs: A Comprehensive Review
title_fullStr Functional Micropeptides Encoded by Long Non-Coding RNAs: A Comprehensive Review
title_full_unstemmed Functional Micropeptides Encoded by Long Non-Coding RNAs: A Comprehensive Review
title_short Functional Micropeptides Encoded by Long Non-Coding RNAs: A Comprehensive Review
title_sort functional micropeptides encoded by long non-coding rnas: a comprehensive review
topic Molecular Biosciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9234465/
https://www.ncbi.nlm.nih.gov/pubmed/35769907
http://dx.doi.org/10.3389/fmolb.2022.817517
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