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A comprehensive review of artificial intelligence and network based approaches to drug repurposing in Covid-19

Conventional drug discovery and development is tedious and time-taking process; because of which it has failed to keep the required pace to mitigate threats and cater demands of viral and re-occurring diseases, such as Covid-19. The main reasons of this delay in traditional drug development are: hig...

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Autores principales: Ahmed, Faheem, Soomro, Afaque Manzoor, Chethikkattuveli Salih, Abdul Rahim, Samantasinghar, Anupama, Asif, Arun, Kang, In Suk, Choi, Kyung Hyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier Masson SAS. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9236981/
https://www.ncbi.nlm.nih.gov/pubmed/35777222
http://dx.doi.org/10.1016/j.biopha.2022.113350
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author Ahmed, Faheem
Soomro, Afaque Manzoor
Chethikkattuveli Salih, Abdul Rahim
Samantasinghar, Anupama
Asif, Arun
Kang, In Suk
Choi, Kyung Hyun
author_facet Ahmed, Faheem
Soomro, Afaque Manzoor
Chethikkattuveli Salih, Abdul Rahim
Samantasinghar, Anupama
Asif, Arun
Kang, In Suk
Choi, Kyung Hyun
author_sort Ahmed, Faheem
collection PubMed
description Conventional drug discovery and development is tedious and time-taking process; because of which it has failed to keep the required pace to mitigate threats and cater demands of viral and re-occurring diseases, such as Covid-19. The main reasons of this delay in traditional drug development are: high attrition rates, extensive time requirements, and huge financial investment with significant risk. The effective solution to de novo drug discovery is drug repurposing. Previous studies have shown that the network-based approaches and analysis are versatile platform for repurposing as the network biology is used to model the interactions between variety of biological concepts. Herein, we provide a comprehensive background of machine learning and deep learning in drug repurposing while specifically focusing on the applications of network-based approach to drug repurposing in Covid-19, data sources, and tools used. Furthermore, use of network proximity, network diffusion, and AI on network-based drug repurposing for Covid-19 is well-explained. Finally, limitations of network-based approaches in general and specific to network are stated along with future recommendations for better network-based models.
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spelling pubmed-92369812022-06-28 A comprehensive review of artificial intelligence and network based approaches to drug repurposing in Covid-19 Ahmed, Faheem Soomro, Afaque Manzoor Chethikkattuveli Salih, Abdul Rahim Samantasinghar, Anupama Asif, Arun Kang, In Suk Choi, Kyung Hyun Biomed Pharmacother Review Conventional drug discovery and development is tedious and time-taking process; because of which it has failed to keep the required pace to mitigate threats and cater demands of viral and re-occurring diseases, such as Covid-19. The main reasons of this delay in traditional drug development are: high attrition rates, extensive time requirements, and huge financial investment with significant risk. The effective solution to de novo drug discovery is drug repurposing. Previous studies have shown that the network-based approaches and analysis are versatile platform for repurposing as the network biology is used to model the interactions between variety of biological concepts. Herein, we provide a comprehensive background of machine learning and deep learning in drug repurposing while specifically focusing on the applications of network-based approach to drug repurposing in Covid-19, data sources, and tools used. Furthermore, use of network proximity, network diffusion, and AI on network-based drug repurposing for Covid-19 is well-explained. Finally, limitations of network-based approaches in general and specific to network are stated along with future recommendations for better network-based models. The Authors. Published by Elsevier Masson SAS. 2022-09 2022-06-28 /pmc/articles/PMC9236981/ /pubmed/35777222 http://dx.doi.org/10.1016/j.biopha.2022.113350 Text en © 2022 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Review
Ahmed, Faheem
Soomro, Afaque Manzoor
Chethikkattuveli Salih, Abdul Rahim
Samantasinghar, Anupama
Asif, Arun
Kang, In Suk
Choi, Kyung Hyun
A comprehensive review of artificial intelligence and network based approaches to drug repurposing in Covid-19
title A comprehensive review of artificial intelligence and network based approaches to drug repurposing in Covid-19
title_full A comprehensive review of artificial intelligence and network based approaches to drug repurposing in Covid-19
title_fullStr A comprehensive review of artificial intelligence and network based approaches to drug repurposing in Covid-19
title_full_unstemmed A comprehensive review of artificial intelligence and network based approaches to drug repurposing in Covid-19
title_short A comprehensive review of artificial intelligence and network based approaches to drug repurposing in Covid-19
title_sort comprehensive review of artificial intelligence and network based approaches to drug repurposing in covid-19
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9236981/
https://www.ncbi.nlm.nih.gov/pubmed/35777222
http://dx.doi.org/10.1016/j.biopha.2022.113350
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