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Identification and Validation of a Five-Gene Diagnostic Signature for Preeclampsia

Preeclampsia is the leading cause of morbidity and mortality for mothers and newborns worldwide. Despite extensive efforts made to understand the underlying pathology of preeclampsia, there is still no clinically useful effective tool for the early diagnosis of preeclampsia. In this study, we conduc...

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Autores principales: Liu, Yu, Lu, Xiumin, Zhang, Yuhong, Liu, Meimei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9237423/
https://www.ncbi.nlm.nih.gov/pubmed/35774506
http://dx.doi.org/10.3389/fgene.2022.910556
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author Liu, Yu
Lu, Xiumin
Zhang, Yuhong
Liu, Meimei
author_facet Liu, Yu
Lu, Xiumin
Zhang, Yuhong
Liu, Meimei
author_sort Liu, Yu
collection PubMed
description Preeclampsia is the leading cause of morbidity and mortality for mothers and newborns worldwide. Despite extensive efforts made to understand the underlying pathology of preeclampsia, there is still no clinically useful effective tool for the early diagnosis of preeclampsia. In this study, we conducted a retrospectively multicenter discover-validation study to develop and validate a novel biomarker for preeclampsia diagnosis. We identified 38 differentially expressed genes (DEGs) involved in preeclampsia in a case-control study by analyzing expression profiles in the discovery cohort. We developed a 5-mRNA signature (termed PE5-signature) to diagnose preeclampsia from 38 DEGs using recursive feature elimination with a random forest supervised classification algorithm, including ENG, KRT80, CEBPA, RDH13 and WASH9P. The PE5-signature showed high accuracy in discriminating preeclampsia from controls with a receiver operating characteristic area under the curve value (AUC) of 0.971, a sensitivity of 0.842 and a specificity of 0.950. The PE5-signature was then validated in an independent case-control study and achieved a reliable and robust predictive performance with an AUC of 0.929, a sensitivity of 0.696, and a specificity of 0.946. In summary, we have developed and validated a five-mRNA biomarker panel as a risk assessment tool to assist in the detection of preeclampsia. This gene panel has potential clinical value for early preeclampsia diagnosis and may help us better understand the precise mechanisms involved.
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spelling pubmed-92374232022-06-29 Identification and Validation of a Five-Gene Diagnostic Signature for Preeclampsia Liu, Yu Lu, Xiumin Zhang, Yuhong Liu, Meimei Front Genet Genetics Preeclampsia is the leading cause of morbidity and mortality for mothers and newborns worldwide. Despite extensive efforts made to understand the underlying pathology of preeclampsia, there is still no clinically useful effective tool for the early diagnosis of preeclampsia. In this study, we conducted a retrospectively multicenter discover-validation study to develop and validate a novel biomarker for preeclampsia diagnosis. We identified 38 differentially expressed genes (DEGs) involved in preeclampsia in a case-control study by analyzing expression profiles in the discovery cohort. We developed a 5-mRNA signature (termed PE5-signature) to diagnose preeclampsia from 38 DEGs using recursive feature elimination with a random forest supervised classification algorithm, including ENG, KRT80, CEBPA, RDH13 and WASH9P. The PE5-signature showed high accuracy in discriminating preeclampsia from controls with a receiver operating characteristic area under the curve value (AUC) of 0.971, a sensitivity of 0.842 and a specificity of 0.950. The PE5-signature was then validated in an independent case-control study and achieved a reliable and robust predictive performance with an AUC of 0.929, a sensitivity of 0.696, and a specificity of 0.946. In summary, we have developed and validated a five-mRNA biomarker panel as a risk assessment tool to assist in the detection of preeclampsia. This gene panel has potential clinical value for early preeclampsia diagnosis and may help us better understand the precise mechanisms involved. Frontiers Media S.A. 2022-06-14 /pmc/articles/PMC9237423/ /pubmed/35774506 http://dx.doi.org/10.3389/fgene.2022.910556 Text en Copyright © 2022 Liu, Lu, Zhang and Liu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Liu, Yu
Lu, Xiumin
Zhang, Yuhong
Liu, Meimei
Identification and Validation of a Five-Gene Diagnostic Signature for Preeclampsia
title Identification and Validation of a Five-Gene Diagnostic Signature for Preeclampsia
title_full Identification and Validation of a Five-Gene Diagnostic Signature for Preeclampsia
title_fullStr Identification and Validation of a Five-Gene Diagnostic Signature for Preeclampsia
title_full_unstemmed Identification and Validation of a Five-Gene Diagnostic Signature for Preeclampsia
title_short Identification and Validation of a Five-Gene Diagnostic Signature for Preeclampsia
title_sort identification and validation of a five-gene diagnostic signature for preeclampsia
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9237423/
https://www.ncbi.nlm.nih.gov/pubmed/35774506
http://dx.doi.org/10.3389/fgene.2022.910556
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