Cargando…
A theory-based practical solution to correct for sex-differential participation bias
Most genomic cohorts are retrospective where the exposures and outcomes are predetermined prior to sample collection. Therefore, a spurious association between an exposure and an outcome can arise if both variables affect study participation. Such concerns were raised in previous studies questioning...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9238114/ https://www.ncbi.nlm.nih.gov/pubmed/35761388 http://dx.doi.org/10.1186/s13059-022-02703-0 |
_version_ | 1784736958030807040 |
---|---|
author | Lee, Hanbin Han, Buhm |
author_facet | Lee, Hanbin Han, Buhm |
author_sort | Lee, Hanbin |
collection | PubMed |
description | Most genomic cohorts are retrospective where the exposures and outcomes are predetermined prior to sample collection. Therefore, a spurious association between an exposure and an outcome can arise if both variables affect study participation. Such concerns were raised in previous studies questioning the representativeness of the UK Biobank. Recently, a genome-wide association study (GWAS) on biological sex found many autosomal hits and non-negligible autosomal heritability which the authors attribute to selection bias. In this study, we propose a simple and a practical method that can overcome sex-driven selection bias based on theoretical analysis and simulations. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13059-022-02703-0. |
format | Online Article Text |
id | pubmed-9238114 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-92381142022-06-29 A theory-based practical solution to correct for sex-differential participation bias Lee, Hanbin Han, Buhm Genome Biol Short Report Most genomic cohorts are retrospective where the exposures and outcomes are predetermined prior to sample collection. Therefore, a spurious association between an exposure and an outcome can arise if both variables affect study participation. Such concerns were raised in previous studies questioning the representativeness of the UK Biobank. Recently, a genome-wide association study (GWAS) on biological sex found many autosomal hits and non-negligible autosomal heritability which the authors attribute to selection bias. In this study, we propose a simple and a practical method that can overcome sex-driven selection bias based on theoretical analysis and simulations. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13059-022-02703-0. BioMed Central 2022-06-27 /pmc/articles/PMC9238114/ /pubmed/35761388 http://dx.doi.org/10.1186/s13059-022-02703-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Short Report Lee, Hanbin Han, Buhm A theory-based practical solution to correct for sex-differential participation bias |
title | A theory-based practical solution to correct for sex-differential participation bias |
title_full | A theory-based practical solution to correct for sex-differential participation bias |
title_fullStr | A theory-based practical solution to correct for sex-differential participation bias |
title_full_unstemmed | A theory-based practical solution to correct for sex-differential participation bias |
title_short | A theory-based practical solution to correct for sex-differential participation bias |
title_sort | theory-based practical solution to correct for sex-differential participation bias |
topic | Short Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9238114/ https://www.ncbi.nlm.nih.gov/pubmed/35761388 http://dx.doi.org/10.1186/s13059-022-02703-0 |
work_keys_str_mv | AT leehanbin atheorybasedpracticalsolutiontocorrectforsexdifferentialparticipationbias AT hanbuhm atheorybasedpracticalsolutiontocorrectforsexdifferentialparticipationbias AT leehanbin theorybasedpracticalsolutiontocorrectforsexdifferentialparticipationbias AT hanbuhm theorybasedpracticalsolutiontocorrectforsexdifferentialparticipationbias |