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Machine Learning Support for Decision-Making in Kidney Transplantation: Step-by-step Development of a Technological Solution
BACKGROUND: Kidney transplantation is the preferred treatment option for patients with end-stage renal disease. To maximize patient and graft survival, the allocation of donor organs to potential recipients requires careful consideration. OBJECTIVE: This study aimed to develop an innovative technolo...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
JMIR Publications
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9240927/ https://www.ncbi.nlm.nih.gov/pubmed/35700006 http://dx.doi.org/10.2196/34554 |
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author | Paquette, François-Xavier Ghassemi, Amir Bukhtiyarova, Olga Cisse, Moustapha Gagnon, Natanael Della Vecchia, Alexia Rabearivelo, Hobivola A Loudiyi, Youssef |
author_facet | Paquette, François-Xavier Ghassemi, Amir Bukhtiyarova, Olga Cisse, Moustapha Gagnon, Natanael Della Vecchia, Alexia Rabearivelo, Hobivola A Loudiyi, Youssef |
author_sort | Paquette, François-Xavier |
collection | PubMed |
description | BACKGROUND: Kidney transplantation is the preferred treatment option for patients with end-stage renal disease. To maximize patient and graft survival, the allocation of donor organs to potential recipients requires careful consideration. OBJECTIVE: This study aimed to develop an innovative technological solution to enable better prediction of kidney transplant survival for each potential donor-recipient pair. METHODS: We used deidentified data on past organ donors, recipients, and transplant outcomes in the United States from the Scientific Registry of Transplant Recipients. To predict transplant outcomes for potential donor-recipient pairs, we used several survival analysis models, including regression analysis (Cox proportional hazards), random survival forests, and several artificial neural networks (DeepSurv, DeepHit, and recurrent neural network [RNN]). We evaluated the performance of each model in terms of its ability to predict the probability of graft survival after kidney transplantation from deceased donors. Three metrics were used: the C-index, integrated Brier score, and integrated calibration index, along with calibration plots. RESULTS: On the basis of the C-index metrics, the neural network–based models (DeepSurv, DeepHit, and RNN) had better discriminative ability than the Cox model and random survival forest model (0.650, 0.661, and 0.659 vs 0.646 and 0.644, respectively). The proposed RNN model offered a compromise between the good discriminative ability and calibration and was implemented in a technological solution of technology readiness level 4. CONCLUSIONS: Our technological solution based on the RNN model can effectively predict kidney transplant survival and provide support for medical professionals and candidate recipients in determining the most optimal donor-recipient pair. |
format | Online Article Text |
id | pubmed-9240927 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | JMIR Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-92409272022-06-30 Machine Learning Support for Decision-Making in Kidney Transplantation: Step-by-step Development of a Technological Solution Paquette, François-Xavier Ghassemi, Amir Bukhtiyarova, Olga Cisse, Moustapha Gagnon, Natanael Della Vecchia, Alexia Rabearivelo, Hobivola A Loudiyi, Youssef JMIR Med Inform Original Paper BACKGROUND: Kidney transplantation is the preferred treatment option for patients with end-stage renal disease. To maximize patient and graft survival, the allocation of donor organs to potential recipients requires careful consideration. OBJECTIVE: This study aimed to develop an innovative technological solution to enable better prediction of kidney transplant survival for each potential donor-recipient pair. METHODS: We used deidentified data on past organ donors, recipients, and transplant outcomes in the United States from the Scientific Registry of Transplant Recipients. To predict transplant outcomes for potential donor-recipient pairs, we used several survival analysis models, including regression analysis (Cox proportional hazards), random survival forests, and several artificial neural networks (DeepSurv, DeepHit, and recurrent neural network [RNN]). We evaluated the performance of each model in terms of its ability to predict the probability of graft survival after kidney transplantation from deceased donors. Three metrics were used: the C-index, integrated Brier score, and integrated calibration index, along with calibration plots. RESULTS: On the basis of the C-index metrics, the neural network–based models (DeepSurv, DeepHit, and RNN) had better discriminative ability than the Cox model and random survival forest model (0.650, 0.661, and 0.659 vs 0.646 and 0.644, respectively). The proposed RNN model offered a compromise between the good discriminative ability and calibration and was implemented in a technological solution of technology readiness level 4. CONCLUSIONS: Our technological solution based on the RNN model can effectively predict kidney transplant survival and provide support for medical professionals and candidate recipients in determining the most optimal donor-recipient pair. JMIR Publications 2022-06-14 /pmc/articles/PMC9240927/ /pubmed/35700006 http://dx.doi.org/10.2196/34554 Text en ©François-Xavier Paquette, Amir Ghassemi, Olga Bukhtiyarova, Moustapha Cisse, Natanael Gagnon, Alexia Della Vecchia, Hobivola A Rabearivelo, Youssef Loudiyi. Originally published in JMIR Medical Informatics (https://medinform.jmir.org), 14.06.2022. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on https://medinform.jmir.org/, as well as this copyright and license information must be included. |
spellingShingle | Original Paper Paquette, François-Xavier Ghassemi, Amir Bukhtiyarova, Olga Cisse, Moustapha Gagnon, Natanael Della Vecchia, Alexia Rabearivelo, Hobivola A Loudiyi, Youssef Machine Learning Support for Decision-Making in Kidney Transplantation: Step-by-step Development of a Technological Solution |
title | Machine Learning Support for Decision-Making in Kidney Transplantation: Step-by-step Development of a Technological Solution |
title_full | Machine Learning Support for Decision-Making in Kidney Transplantation: Step-by-step Development of a Technological Solution |
title_fullStr | Machine Learning Support for Decision-Making in Kidney Transplantation: Step-by-step Development of a Technological Solution |
title_full_unstemmed | Machine Learning Support for Decision-Making in Kidney Transplantation: Step-by-step Development of a Technological Solution |
title_short | Machine Learning Support for Decision-Making in Kidney Transplantation: Step-by-step Development of a Technological Solution |
title_sort | machine learning support for decision-making in kidney transplantation: step-by-step development of a technological solution |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9240927/ https://www.ncbi.nlm.nih.gov/pubmed/35700006 http://dx.doi.org/10.2196/34554 |
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