Cargando…

Consistency of Mycobacterium tuberculosis Complex Spoligotyping between the Membrane-Based Method and In Silico Approach

To tackle the spread of tuberculosis (TB), epidemiological studies are undertaken worldwide to investigate TB transmission chains. Clustered regulatory interspaced short palindromic repeats (CRISPR) locus diversity, also called spoligotyping, is a widely used genotyping assay for the characterizatio...

Descripción completa

Detalles Bibliográficos
Autores principales:	Genestet, Charlotte, Hodille, Elisabeth, Bernard, Albin, Vallée, Maxime, Lina, Gérard, Le Meur, Adrien, Refrégier, Guislaine, Dumitrescua, Oana
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	American Society for Microbiology 2022
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9241810/ https://www.ncbi.nlm.nih.gov/pubmed/35467406 http://dx.doi.org/10.1128/spectrum.00223-22

Ejemplares similares

Development, Evaluation, and Implementation of a House-Made Targeted Next-Generation Sequencing Spoligotyping in a French Laboratory
por: Genestet, Charlotte, et al.
Publicado: (2022)

Mycobacterium tuberculosis Diversity Exploration: A Way to Serve the Three Main Weapons against Epidemics, Hygiene, Vaccine Development and Chemotherapy
por: Refrégier, Guislaine, et al.
Publicado: (2022)

Spoligotyping of Mycobacterium africanum, Burkina Faso
por: Gomgnimbou, Michel K., et al.
Publicado: (2012)

Comparison of in silico predicted Mycobacterium tuberculosis spoligotypes and lineages from whole genome sequencing data
por: Napier, Gary, et al.
Publicado: (2023)

Investigating the Diversity of Tuberculosis Spoligotypes with Dimensionality Reduction and Graph Theory
por: Senelle, Gaetan, et al.
Publicado: (2022)

Spoligotyping and Mycobacterium tuberculosis
por: Gori, Andrea, et al.
Publicado: (2005)

Global Distribution of Mycobacterium tuberculosis Spoligotypes
por: Filliol, Ingrid, et al.
Publicado: (2002)

Rifampicin exposure reveals within-host Mycobacterium tuberculosis diversity in patients with delayed culture conversion
por: Genestet, Charlotte, et al.
Publicado: (2021)

The MTB/MDR ELITe MGB(®) Kit: Performance Assessment for Pulmonary, Extra-Pulmonary, and Resistant Tuberculosis Diagnosis, and Integration in the Laboratory Workflow of a French Center
por: Hodille, Elisabeth, et al.
Publicado: (2021)

Diversity of Mycobacterium tuberculosis in the Middle Fly District of Western Province, Papua New Guinea: microbead-based spoligotyping using DNA from Ziehl-Neelsen-stained microscopy preparations
por: Guernier-Cambert, Vanina, et al.
Publicado: (2019)

Unexpected diversity of CRISPR unveils some evolutionary patterns of repeated sequences in Mycobacterium tuberculosis
por: Refrégier, Guislaine, et al.
Publicado: (2020)

The future of CRISPR in Mycobacterium tuberculosis infection
por: Zein-Eddine, Rima, et al.
Publicado: (2023)

SpoTyping: fast and accurate in silico Mycobacterium spoligotyping from sequence reads
por: Xia, Eryu, et al.
Publicado: (2016)

CRISPRbuilder-TB: “CRISPR-builder for tuberculosis”. Exhaustive reconstruction of the CRISPR locus in mycobacterium tuberculosis complex using SRA
por: Guyeux, Christophe, et al.
Publicado: (2021)

Spoligotype Variation of Mycobacterium tuberculosis Strains Prevailing in Korea
por: Song, Seung-Eun, et al.
Publicado: (2020)

The use of microbead-based spoligotyping for Mycobacterium tuberculosis complex to evaluate the quality of the conventional method: Providing guidelines for Quality Assurance when working on membranes
por: Abadia, Edgar, et al.
Publicado: (2011)

Clustering of Mycobacterium tuberculosis Cases in Acapulco: Spoligotyping and Risk Factors
por: Nava-Aguilera, Elizabeth, et al.
Publicado: (2011)

Spoligotyping analysis of Mycobacterium tuberculosis in Khyber Pakhtunkhwa area, Pakistan
por: Ali, Sajid, et al.
Publicado: (2019)

Molecular epidemiology of Mycobacterium tuberculosis isolates in Iran using spoligotyping
por: Ramazanzadeh, R., et al.
Publicado: (2020)

Mycobacterium bovis in Swine: Spoligotyping of Isolates from Argentina
por: Barandiaran, Soledad, et al.
Publicado: (2011)

A first assessment of the genetic diversity of Mycobacterium tuberculosis complex in Cambodia
por: Zhang, Jian, et al.
Publicado: (2011)

Spoligotyping based genetic diversity of Mycobacterium tuberculosis in Ethiopia: a systematic review
por: Tulu, Begna, et al.
Publicado: (2018)

Genetic diversity of Mycobacterium tuberculosis in south coastal Karnataka, India, using spoligotyping
por: Chawla, Kiran, et al.
Publicado: (2018)

Spoligotype‐based population structure of Mycobacterium tuberculosis in the Jimma Zone, southwest Ethiopia
por: Abebe, Gemeda, et al.
Publicado: (2018)

Spoligotyping of Clinical Isolates of Mycobacterium tuberculosis Complex Species in the Oromia Region of Ethiopia
por: Hussien, Bedru, et al.
Publicado: (2022)

Connection between two historical tuberculosis outbreak sites in Japan, Honshu, by a new ancestral Mycobacterium tuberculosis L2 sublineage
por: Guyeux, Christophe, et al.
Publicado: (2022)

Genetic evaluation of Mycobacterium bovis isolates with MIRU-VNTR and spoligotyping
por: TUZCU, Nevin, et al.
Publicado: (2020)

Spoligotyping and Drug Resistance Analysis of Mycobacterium tuberculosis Strains from National Survey in China
por: Pang, Yu, et al.
Publicado: (2012)

Spoligotype database of Mycobacterium tuberculosis: biogeographic distribution of shared types and epidemiologic and phylogenetic perspectives.
por: Sola, C, et al.
Publicado: (2001)

Characterization of Mycobacterium tuberculosis complex isolated from iranian and afghani patients by spoligotyping method
por: Ramazanzadeh, Rashid, et al.
Publicado: (2009)

Spoligotyping and drug resistance patterns of Mycobacterium tuberculosis isolates from five provinces of Iran
por: Haeili, Mehri, et al.
Publicado: (2013)

Spoligotype Diversity of Mycobacterium tuberculosis over Two Decades from Tiruvallur, South India
por: Siva Kumar, S., et al.
Publicado: (2020)

The Emergence of Novel Spoligotypes of Highly Drug-Resistant Mycobacterium tuberculosis Isolates in Fujian, China
por: Lin, Shufang, et al.
Publicado: (2022)

Predominant Tuberculosis Spoligotypes, Delhi, India
por: Singh, Urvashi Balbir, et al.
Publicado: (2004)

Genomics and Machine Learning for Taxonomy Consensus: The Mycobacterium tuberculosis Complex Paradigm
por: Azé, Jérôme, et al.
Publicado: (2015)

Mycobacterium tuberculosis spoligotypes and drug susceptibility pattern of isolates from tuberculosis patients in South-Western Uganda
por: Bazira, Joel, et al.
Publicado: (2011)

Synchronous Comparison of Mycobacterium tuberculosis Epidemiology Strains by “MIRU-VNTR” and “MIRU-VNTR and Spoligotyping” Technique
por: Jafarian, Mehdi, et al.
Publicado: (2010)

SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences
por: Coll, Francesc, et al.
Publicado: (2012)

Microbead-based spoligotyping of Mycobacterium tuberculosis from Ziehl-Neelsen-stained microscopy preparations in Ethiopia
por: Molina-Moya, Barbara, et al.
Publicado: (2018)

Role of MIRU-VNTR and spoligotyping in assessing the genetic diversity of Mycobacterium tuberculosis in Henan Province, China
por: Shi, Jie, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_ijqbd3i7ib5n4l1qkm9nso9df9