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Assessing the Variability of Cell-Associated HIV DNA Quantification through a Multicenter Collaborative Study

Reliable and accurate quantification of cell-associated HIV DNA (CA HIV DNA) is critical for early infant diagnosis, clinical management of patients under therapy, and to inform new therapeutics efficacy. The present study assessed the variability of CA HIV DNA quantification obtained from various a...

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Autores principales: Le Duff, Yann, Gärtner, Kathleen, Busby, Eloise J., Dalzini, Annalisa, Danaviah, Sivapragashini, Fuentes, José Luis Jiménez, Giaquinto, Carlo, Huggett, Jim F., Hurley, Matthew, Marcellin, Anne-Geneviève, Muñoz-Fernández, María Ángeles, O’Sullivan, Denise M., Persaud, Deborah, Powell, Laura, Rigsby, Peter, Rossi, Paolo, de Rossi, Anita, Siems, Lilly, Smit, Theresa, Watters, Sarah A., Almond, Neil, Nastouli, Eleni
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9241949/
https://www.ncbi.nlm.nih.gov/pubmed/35658711
http://dx.doi.org/10.1128/spectrum.00243-22
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author Le Duff, Yann
Gärtner, Kathleen
Busby, Eloise J.
Dalzini, Annalisa
Danaviah, Sivapragashini
Fuentes, José Luis Jiménez
Giaquinto, Carlo
Huggett, Jim F.
Hurley, Matthew
Marcellin, Anne-Geneviève
Muñoz-Fernández, María Ángeles
O’Sullivan, Denise M.
Persaud, Deborah
Powell, Laura
Rigsby, Peter
Rossi, Paolo
de Rossi, Anita
Siems, Lilly
Smit, Theresa
Watters, Sarah A.
Almond, Neil
Nastouli, Eleni
author_facet Le Duff, Yann
Gärtner, Kathleen
Busby, Eloise J.
Dalzini, Annalisa
Danaviah, Sivapragashini
Fuentes, José Luis Jiménez
Giaquinto, Carlo
Huggett, Jim F.
Hurley, Matthew
Marcellin, Anne-Geneviève
Muñoz-Fernández, María Ángeles
O’Sullivan, Denise M.
Persaud, Deborah
Powell, Laura
Rigsby, Peter
Rossi, Paolo
de Rossi, Anita
Siems, Lilly
Smit, Theresa
Watters, Sarah A.
Almond, Neil
Nastouli, Eleni
author_sort Le Duff, Yann
collection PubMed
description Reliable and accurate quantification of cell-associated HIV DNA (CA HIV DNA) is critical for early infant diagnosis, clinical management of patients under therapy, and to inform new therapeutics efficacy. The present study assessed the variability of CA HIV DNA quantification obtained from various assays and the value of using reference materials to help harmonize the measurements. Using a common set of reagents, our multicenter collaborative study highlights significant variability of CA HIV DNA quantification and lower limit of quantification across assays. The quantification of CA HIV DNA from a panel of infected PBMCs can be harmonized through cross-subtype normalization but assay calibration with the commonly used 8E5 cell line failed to reduce quantification variability between assays, demonstrating the requirement to thoroughly evaluate reference material candidates to help improve the comparability of CA HIV DNA diagnostic assay performance. IMPORTANCE Despite a global effort, HIV remains a major public health burden with an estimated 1.5 million new infections occurring in 2020. HIV DNA is an important viral marker, and its monitoring plays a critical role in the fight against HIV: supporting diagnosis in infants and underpinning clinical management of patients under therapy. Our study demonstrates that HIV DNA measurement of the same samples can vary significantly from one laboratory to another, due to heterogeneity in the assay, protocol, and reagents used. We show that when carefully selected, reference materials can reduce measurement variability and harmonize HIV DNA quantification across laboratories, which will help contribute to improved diagnosis and clinical management of patients living with HIV.
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spelling pubmed-92419492022-06-30 Assessing the Variability of Cell-Associated HIV DNA Quantification through a Multicenter Collaborative Study Le Duff, Yann Gärtner, Kathleen Busby, Eloise J. Dalzini, Annalisa Danaviah, Sivapragashini Fuentes, José Luis Jiménez Giaquinto, Carlo Huggett, Jim F. Hurley, Matthew Marcellin, Anne-Geneviève Muñoz-Fernández, María Ángeles O’Sullivan, Denise M. Persaud, Deborah Powell, Laura Rigsby, Peter Rossi, Paolo de Rossi, Anita Siems, Lilly Smit, Theresa Watters, Sarah A. Almond, Neil Nastouli, Eleni Microbiol Spectr Research Article Reliable and accurate quantification of cell-associated HIV DNA (CA HIV DNA) is critical for early infant diagnosis, clinical management of patients under therapy, and to inform new therapeutics efficacy. The present study assessed the variability of CA HIV DNA quantification obtained from various assays and the value of using reference materials to help harmonize the measurements. Using a common set of reagents, our multicenter collaborative study highlights significant variability of CA HIV DNA quantification and lower limit of quantification across assays. The quantification of CA HIV DNA from a panel of infected PBMCs can be harmonized through cross-subtype normalization but assay calibration with the commonly used 8E5 cell line failed to reduce quantification variability between assays, demonstrating the requirement to thoroughly evaluate reference material candidates to help improve the comparability of CA HIV DNA diagnostic assay performance. IMPORTANCE Despite a global effort, HIV remains a major public health burden with an estimated 1.5 million new infections occurring in 2020. HIV DNA is an important viral marker, and its monitoring plays a critical role in the fight against HIV: supporting diagnosis in infants and underpinning clinical management of patients under therapy. Our study demonstrates that HIV DNA measurement of the same samples can vary significantly from one laboratory to another, due to heterogeneity in the assay, protocol, and reagents used. We show that when carefully selected, reference materials can reduce measurement variability and harmonize HIV DNA quantification across laboratories, which will help contribute to improved diagnosis and clinical management of patients living with HIV. American Society for Microbiology 2022-06-06 /pmc/articles/PMC9241949/ /pubmed/35658711 http://dx.doi.org/10.1128/spectrum.00243-22 Text en © Crown copyright 2022. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research Article
Le Duff, Yann
Gärtner, Kathleen
Busby, Eloise J.
Dalzini, Annalisa
Danaviah, Sivapragashini
Fuentes, José Luis Jiménez
Giaquinto, Carlo
Huggett, Jim F.
Hurley, Matthew
Marcellin, Anne-Geneviève
Muñoz-Fernández, María Ángeles
O’Sullivan, Denise M.
Persaud, Deborah
Powell, Laura
Rigsby, Peter
Rossi, Paolo
de Rossi, Anita
Siems, Lilly
Smit, Theresa
Watters, Sarah A.
Almond, Neil
Nastouli, Eleni
Assessing the Variability of Cell-Associated HIV DNA Quantification through a Multicenter Collaborative Study
title Assessing the Variability of Cell-Associated HIV DNA Quantification through a Multicenter Collaborative Study
title_full Assessing the Variability of Cell-Associated HIV DNA Quantification through a Multicenter Collaborative Study
title_fullStr Assessing the Variability of Cell-Associated HIV DNA Quantification through a Multicenter Collaborative Study
title_full_unstemmed Assessing the Variability of Cell-Associated HIV DNA Quantification through a Multicenter Collaborative Study
title_short Assessing the Variability of Cell-Associated HIV DNA Quantification through a Multicenter Collaborative Study
title_sort assessing the variability of cell-associated hiv dna quantification through a multicenter collaborative study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9241949/
https://www.ncbi.nlm.nih.gov/pubmed/35658711
http://dx.doi.org/10.1128/spectrum.00243-22
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