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A Key Molecular Regulator, RNA G-Quadruplex and Its Function in Plants

RNA structure plays key roles in plant growth, development, and adaptation. One of the complex RNA structures is the RNA G-quadruplex (RG4) where guanine-rich sequences are folded into two or more layers of G-quartets. Previous computational predictions of RG4 revealed that it is widespread across t...

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Autores principales: Liu, Haifeng, Chu, Zhaohui, Yang, Xiaofei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9242502/
https://www.ncbi.nlm.nih.gov/pubmed/35783953
http://dx.doi.org/10.3389/fpls.2022.926953
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author Liu, Haifeng
Chu, Zhaohui
Yang, Xiaofei
author_facet Liu, Haifeng
Chu, Zhaohui
Yang, Xiaofei
author_sort Liu, Haifeng
collection PubMed
description RNA structure plays key roles in plant growth, development, and adaptation. One of the complex RNA structures is the RNA G-quadruplex (RG4) where guanine-rich sequences are folded into two or more layers of G-quartets. Previous computational predictions of RG4 revealed that it is widespread across the whole transcriptomes in many plant species, raising the hypothesis that RG4 is likely to be an important regulatory motif in plants. Recently, with the advances in both high-throughput sequencing and cell imaging technologies, RG4 can be detected in living cells as well as at the genome-wide scale. Here, we provide a comprehensive review of recent developments in new methods for detecting RG4 in plants. We also summarize the new functions of RG4 in regulating plant growth and development. We then discuss the possible role of RG4 in adapting to environmental conditions along with evolutionary perspectives.
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spelling pubmed-92425022022-06-30 A Key Molecular Regulator, RNA G-Quadruplex and Its Function in Plants Liu, Haifeng Chu, Zhaohui Yang, Xiaofei Front Plant Sci Plant Science RNA structure plays key roles in plant growth, development, and adaptation. One of the complex RNA structures is the RNA G-quadruplex (RG4) where guanine-rich sequences are folded into two or more layers of G-quartets. Previous computational predictions of RG4 revealed that it is widespread across the whole transcriptomes in many plant species, raising the hypothesis that RG4 is likely to be an important regulatory motif in plants. Recently, with the advances in both high-throughput sequencing and cell imaging technologies, RG4 can be detected in living cells as well as at the genome-wide scale. Here, we provide a comprehensive review of recent developments in new methods for detecting RG4 in plants. We also summarize the new functions of RG4 in regulating plant growth and development. We then discuss the possible role of RG4 in adapting to environmental conditions along with evolutionary perspectives. Frontiers Media S.A. 2022-06-15 /pmc/articles/PMC9242502/ /pubmed/35783953 http://dx.doi.org/10.3389/fpls.2022.926953 Text en Copyright © 2022 Liu, Chu and Yang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Liu, Haifeng
Chu, Zhaohui
Yang, Xiaofei
A Key Molecular Regulator, RNA G-Quadruplex and Its Function in Plants
title A Key Molecular Regulator, RNA G-Quadruplex and Its Function in Plants
title_full A Key Molecular Regulator, RNA G-Quadruplex and Its Function in Plants
title_fullStr A Key Molecular Regulator, RNA G-Quadruplex and Its Function in Plants
title_full_unstemmed A Key Molecular Regulator, RNA G-Quadruplex and Its Function in Plants
title_short A Key Molecular Regulator, RNA G-Quadruplex and Its Function in Plants
title_sort key molecular regulator, rna g-quadruplex and its function in plants
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9242502/
https://www.ncbi.nlm.nih.gov/pubmed/35783953
http://dx.doi.org/10.3389/fpls.2022.926953
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