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Automatic Artifact Detection Algorithm in Fetal MRI

Fetal MR imaging is subject to artifacts including motion, chemical shift, and radiofrequency artifacts. Currently, such artifacts are detected by the MRI operator, a process which is subjective, time consuming, and prone to errors. We propose a novel algorithm, RISE-Net, that can consistently, auto...

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Autores principales: Lim, Adam, Lo, Justin, Wagner, Matthias W., Ertl-Wagner, Birgit, Sussman, Dafna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9244144/
https://www.ncbi.nlm.nih.gov/pubmed/35783351
http://dx.doi.org/10.3389/frai.2022.861791
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author Lim, Adam
Lo, Justin
Wagner, Matthias W.
Ertl-Wagner, Birgit
Sussman, Dafna
author_facet Lim, Adam
Lo, Justin
Wagner, Matthias W.
Ertl-Wagner, Birgit
Sussman, Dafna
author_sort Lim, Adam
collection PubMed
description Fetal MR imaging is subject to artifacts including motion, chemical shift, and radiofrequency artifacts. Currently, such artifacts are detected by the MRI operator, a process which is subjective, time consuming, and prone to errors. We propose a novel algorithm, RISE-Net, that can consistently, automatically, and objectively detect artifacts in 3D fetal MRI. It makes use of a CNN ensemble approach where the first CNN aims to identify and classify any artifacts in the image, and the second CNN uses regression to determine the severity of the detected artifacts. The main mechanism in RISE-Net is the stacked Residual, Inception, Squeeze and Excitation (RISE) blocks. This classification network achieved an accuracy of 90.34% and a F1 score of 90.39% and outperformed other state-of-the-art architectures, such as VGG-16, Inception, ResNet-50, ReNet-Inception, SE-ResNet, and SE-Inception. The severity regression network had an MSE of 0.083 across all classes. The presented algorithm facilitates rapid and accurate fetal MRI quality assurance that can be implemented into clinical use.
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spelling pubmed-92441442022-07-01 Automatic Artifact Detection Algorithm in Fetal MRI Lim, Adam Lo, Justin Wagner, Matthias W. Ertl-Wagner, Birgit Sussman, Dafna Front Artif Intell Artificial Intelligence Fetal MR imaging is subject to artifacts including motion, chemical shift, and radiofrequency artifacts. Currently, such artifacts are detected by the MRI operator, a process which is subjective, time consuming, and prone to errors. We propose a novel algorithm, RISE-Net, that can consistently, automatically, and objectively detect artifacts in 3D fetal MRI. It makes use of a CNN ensemble approach where the first CNN aims to identify and classify any artifacts in the image, and the second CNN uses regression to determine the severity of the detected artifacts. The main mechanism in RISE-Net is the stacked Residual, Inception, Squeeze and Excitation (RISE) blocks. This classification network achieved an accuracy of 90.34% and a F1 score of 90.39% and outperformed other state-of-the-art architectures, such as VGG-16, Inception, ResNet-50, ReNet-Inception, SE-ResNet, and SE-Inception. The severity regression network had an MSE of 0.083 across all classes. The presented algorithm facilitates rapid and accurate fetal MRI quality assurance that can be implemented into clinical use. Frontiers Media S.A. 2022-06-16 /pmc/articles/PMC9244144/ /pubmed/35783351 http://dx.doi.org/10.3389/frai.2022.861791 Text en Copyright © 2022 Lim, Lo, Wagner, Ertl-Wagner and Sussman. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Artificial Intelligence
Lim, Adam
Lo, Justin
Wagner, Matthias W.
Ertl-Wagner, Birgit
Sussman, Dafna
Automatic Artifact Detection Algorithm in Fetal MRI
title Automatic Artifact Detection Algorithm in Fetal MRI
title_full Automatic Artifact Detection Algorithm in Fetal MRI
title_fullStr Automatic Artifact Detection Algorithm in Fetal MRI
title_full_unstemmed Automatic Artifact Detection Algorithm in Fetal MRI
title_short Automatic Artifact Detection Algorithm in Fetal MRI
title_sort automatic artifact detection algorithm in fetal mri
topic Artificial Intelligence
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9244144/
https://www.ncbi.nlm.nih.gov/pubmed/35783351
http://dx.doi.org/10.3389/frai.2022.861791
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