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Probing Adaptation of Hydration and Protein Dynamics to Temperature

[Image: see text] Protein dynamics is strongly influenced by the surrounding environment and physiological conditions. Here we employ broadband megahertz-to-terahertz spectroscopy to explore the dynamics of water and myoglobin protein on an extended time scale from femto- to nanosecond. The dielectr...

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Autores principales: Doan, Luan C., Dahanayake, Jayangika N., Mitchell-Koch, Katie R., Singh, Abhishek K., Vinh, Nguyen Q.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9245114/
https://www.ncbi.nlm.nih.gov/pubmed/35785325
http://dx.doi.org/10.1021/acsomega.2c02843
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author Doan, Luan C.
Dahanayake, Jayangika N.
Mitchell-Koch, Katie R.
Singh, Abhishek K.
Vinh, Nguyen Q.
author_facet Doan, Luan C.
Dahanayake, Jayangika N.
Mitchell-Koch, Katie R.
Singh, Abhishek K.
Vinh, Nguyen Q.
author_sort Doan, Luan C.
collection PubMed
description [Image: see text] Protein dynamics is strongly influenced by the surrounding environment and physiological conditions. Here we employ broadband megahertz-to-terahertz spectroscopy to explore the dynamics of water and myoglobin protein on an extended time scale from femto- to nanosecond. The dielectric spectra reveal several relaxations corresponding to the orientational polarization mechanism, including the dynamics of loosely bound, tightly bound, and bulk water, as well as collective vibrational modes of protein in an aqueous environment. The dynamics of loosely bound and bulk water follow non-Arrhenius behavior; however, the dynamics of water molecules in the tightly bound layer obeys the Arrhenius-type relation. Combining molecular simulations and effective-medium approximation, we have determined the number of water molecules in the tightly bound hydration layer and studied the dynamics of protein as a function of temperature. The results provide the important impact of water on the biochemical functions of proteins.
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spelling pubmed-92451142022-07-01 Probing Adaptation of Hydration and Protein Dynamics to Temperature Doan, Luan C. Dahanayake, Jayangika N. Mitchell-Koch, Katie R. Singh, Abhishek K. Vinh, Nguyen Q. ACS Omega [Image: see text] Protein dynamics is strongly influenced by the surrounding environment and physiological conditions. Here we employ broadband megahertz-to-terahertz spectroscopy to explore the dynamics of water and myoglobin protein on an extended time scale from femto- to nanosecond. The dielectric spectra reveal several relaxations corresponding to the orientational polarization mechanism, including the dynamics of loosely bound, tightly bound, and bulk water, as well as collective vibrational modes of protein in an aqueous environment. The dynamics of loosely bound and bulk water follow non-Arrhenius behavior; however, the dynamics of water molecules in the tightly bound layer obeys the Arrhenius-type relation. Combining molecular simulations and effective-medium approximation, we have determined the number of water molecules in the tightly bound hydration layer and studied the dynamics of protein as a function of temperature. The results provide the important impact of water on the biochemical functions of proteins. American Chemical Society 2022-06-13 /pmc/articles/PMC9245114/ /pubmed/35785325 http://dx.doi.org/10.1021/acsomega.2c02843 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Doan, Luan C.
Dahanayake, Jayangika N.
Mitchell-Koch, Katie R.
Singh, Abhishek K.
Vinh, Nguyen Q.
Probing Adaptation of Hydration and Protein Dynamics to Temperature
title Probing Adaptation of Hydration and Protein Dynamics to Temperature
title_full Probing Adaptation of Hydration and Protein Dynamics to Temperature
title_fullStr Probing Adaptation of Hydration and Protein Dynamics to Temperature
title_full_unstemmed Probing Adaptation of Hydration and Protein Dynamics to Temperature
title_short Probing Adaptation of Hydration and Protein Dynamics to Temperature
title_sort probing adaptation of hydration and protein dynamics to temperature
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9245114/
https://www.ncbi.nlm.nih.gov/pubmed/35785325
http://dx.doi.org/10.1021/acsomega.2c02843
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