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Bayesian Distance Clustering
Model-based clustering is widely used in a variety of application areas. However, fundamental concerns remain about robustness. In particular, results can be sensitive to the choice of kernel representing the within-cluster data density. Leveraging on properties of pairwise differences between data...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9245927/ https://www.ncbi.nlm.nih.gov/pubmed/35782785 |
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author | Duan, Leo L Dunson, David B |
author_facet | Duan, Leo L Dunson, David B |
author_sort | Duan, Leo L |
collection | PubMed |
description | Model-based clustering is widely used in a variety of application areas. However, fundamental concerns remain about robustness. In particular, results can be sensitive to the choice of kernel representing the within-cluster data density. Leveraging on properties of pairwise differences between data points, we propose a class of Bayesian distance clustering methods, which rely on modeling the likelihood of the pairwise distances in place of the original data. Although some information in the data is discarded, we gain substantial robustness to modeling assumptions. The proposed approach represents an appealing middle ground between distance- and model-based clustering, drawing advantages from each of these canonical approaches. We illustrate dramatic gains in the ability to infer clusters that are not well represented by the usual choices of kernel. A simulation study is included to assess performance relative to competitors, and we apply the approach to clustering of brain genome expression data. |
format | Online Article Text |
id | pubmed-9245927 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
record_format | MEDLINE/PubMed |
spelling | pubmed-92459272022-06-30 Bayesian Distance Clustering Duan, Leo L Dunson, David B J Mach Learn Res Article Model-based clustering is widely used in a variety of application areas. However, fundamental concerns remain about robustness. In particular, results can be sensitive to the choice of kernel representing the within-cluster data density. Leveraging on properties of pairwise differences between data points, we propose a class of Bayesian distance clustering methods, which rely on modeling the likelihood of the pairwise distances in place of the original data. Although some information in the data is discarded, we gain substantial robustness to modeling assumptions. The proposed approach represents an appealing middle ground between distance- and model-based clustering, drawing advantages from each of these canonical approaches. We illustrate dramatic gains in the ability to infer clusters that are not well represented by the usual choices of kernel. A simulation study is included to assess performance relative to competitors, and we apply the approach to clustering of brain genome expression data. 2021 /pmc/articles/PMC9245927/ /pubmed/35782785 Text en https://creativecommons.org/licenses/by/4.0/License: CC-BY 4.0, see https://creativecommons.org/licenses/by/4.0/. Attribution requirements are provided at http://jmlr.org/papers/v22/20-688.html. (http://jmlr.org/papers/v22/20-688.html) |
spellingShingle | Article Duan, Leo L Dunson, David B Bayesian Distance Clustering |
title | Bayesian Distance Clustering |
title_full | Bayesian Distance Clustering |
title_fullStr | Bayesian Distance Clustering |
title_full_unstemmed | Bayesian Distance Clustering |
title_short | Bayesian Distance Clustering |
title_sort | bayesian distance clustering |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9245927/ https://www.ncbi.nlm.nih.gov/pubmed/35782785 |
work_keys_str_mv | AT duanleol bayesiandistanceclustering AT dunsondavidb bayesiandistanceclustering |