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The complete chloroplast genome sequence of Begonia arachnoidea (Begoniaceae)
There are more than 2035 Begonia species (Begoniaceae) reported currently in the world. Begonia arachnoidea was found as a new species within a small area in Southern China. In this study, we are reporting for the first time its chloroplast genome for the purpose to compare with the chloroplast geno...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9245980/ https://www.ncbi.nlm.nih.gov/pubmed/35783041 http://dx.doi.org/10.1080/23802359.2022.2087548 |
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author | Tao, Da-Yan Yan, Hai-Xia Zhou, Jin-Ye Rong, Jian-Bo Song, Qian Guan, Shi-Kai Luo, Shuming |
author_facet | Tao, Da-Yan Yan, Hai-Xia Zhou, Jin-Ye Rong, Jian-Bo Song, Qian Guan, Shi-Kai Luo, Shuming |
author_sort | Tao, Da-Yan |
collection | PubMed |
description | There are more than 2035 Begonia species (Begoniaceae) reported currently in the world. Begonia arachnoidea was found as a new species within a small area in Southern China. In this study, we are reporting for the first time its chloroplast genome for the purpose to compare with the chloroplast genomic data from other plant taxa which were closely related to this new species. Our results show that the circular chloroplast genome of B. arachnoidea is 169,725 bp in length, with 35.49% GC content. The whole structure of the genome has 76,431 bp in a large single-copy (LSC) region, 18,146 bp in a small single-copy (SSC) region, and the two inverted repeat (IRs) regions are both 37,574 bp. There are 90 protein-coding genes, 8 rRNA genes, and 42 tRNA genes encoded in this genome. Final phylogenetic analysis revealed that B. arachnoidea is genetically closest to B. pulchrifolia and B. coptidifolia. |
format | Online Article Text |
id | pubmed-9245980 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-92459802022-07-01 The complete chloroplast genome sequence of Begonia arachnoidea (Begoniaceae) Tao, Da-Yan Yan, Hai-Xia Zhou, Jin-Ye Rong, Jian-Bo Song, Qian Guan, Shi-Kai Luo, Shuming Mitochondrial DNA B Resour Plastome Announcement There are more than 2035 Begonia species (Begoniaceae) reported currently in the world. Begonia arachnoidea was found as a new species within a small area in Southern China. In this study, we are reporting for the first time its chloroplast genome for the purpose to compare with the chloroplast genomic data from other plant taxa which were closely related to this new species. Our results show that the circular chloroplast genome of B. arachnoidea is 169,725 bp in length, with 35.49% GC content. The whole structure of the genome has 76,431 bp in a large single-copy (LSC) region, 18,146 bp in a small single-copy (SSC) region, and the two inverted repeat (IRs) regions are both 37,574 bp. There are 90 protein-coding genes, 8 rRNA genes, and 42 tRNA genes encoded in this genome. Final phylogenetic analysis revealed that B. arachnoidea is genetically closest to B. pulchrifolia and B. coptidifolia. Taylor & Francis 2022-06-23 /pmc/articles/PMC9245980/ /pubmed/35783041 http://dx.doi.org/10.1080/23802359.2022.2087548 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Plastome Announcement Tao, Da-Yan Yan, Hai-Xia Zhou, Jin-Ye Rong, Jian-Bo Song, Qian Guan, Shi-Kai Luo, Shuming The complete chloroplast genome sequence of Begonia arachnoidea (Begoniaceae) |
title | The complete chloroplast genome sequence of Begonia arachnoidea (Begoniaceae) |
title_full | The complete chloroplast genome sequence of Begonia arachnoidea (Begoniaceae) |
title_fullStr | The complete chloroplast genome sequence of Begonia arachnoidea (Begoniaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Begonia arachnoidea (Begoniaceae) |
title_short | The complete chloroplast genome sequence of Begonia arachnoidea (Begoniaceae) |
title_sort | complete chloroplast genome sequence of begonia arachnoidea (begoniaceae) |
topic | Plastome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9245980/ https://www.ncbi.nlm.nih.gov/pubmed/35783041 http://dx.doi.org/10.1080/23802359.2022.2087548 |
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