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Evaluating Prediction of Continuous Clinical Values: A Glucose Case Study
Background It would be useful to be able to assess the utility of predictive models of continuous values before clinical trials are performed. Objective The aim of the study is to compare metrics to assess the potential clinical utility of models that produce continuous value forecasts. Methods W...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Georg Thieme Verlag KG
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9246512/ https://www.ncbi.nlm.nih.gov/pubmed/35196735 http://dx.doi.org/10.1055/s-0042-1743170 |
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author | Hripcsak, George Albers, David J. |
author_facet | Hripcsak, George Albers, David J. |
author_sort | Hripcsak, George |
collection | PubMed |
description | Background It would be useful to be able to assess the utility of predictive models of continuous values before clinical trials are performed. Objective The aim of the study is to compare metrics to assess the potential clinical utility of models that produce continuous value forecasts. Methods We ran a set of data assimilation forecast algorithms on time series of glucose measurements from neurological intensive care unit patients. We evaluated the forecasts using four sets of metrics: glucose root mean square (RMS) error, a set of metrics on a transformed glucose value, the estimated effect on clinical care based on an insulin guideline, and a glucose measurement error grid (Parkes grid). We assessed correlation among the metrics and created a set of factor models. Results The metrics generally correlated with each other, but those that estimated the effect on clinical care correlated with others the least and were generally associated with their own independent factors. The other metrics appeared to separate into those that emphasized errors in low glucose versus errors in high glucose. The Parkes grid was well correlated with the transformed glucose but not the estimation of clinical care. Discussion Our results indicate that we need to be careful before we assume that commonly used metrics like RMS error in raw glucose or even metrics like the Parkes grid that are designed to measure importance of differences will correlate well with actual effect on clinical care processes. A combination of metrics appeared to explain the most variance between cases. As prediction algorithms move into practice, it will be important to measure actual effects. |
format | Online Article Text |
id | pubmed-9246512 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Georg Thieme Verlag KG |
record_format | MEDLINE/PubMed |
spelling | pubmed-92465122022-07-01 Evaluating Prediction of Continuous Clinical Values: A Glucose Case Study Hripcsak, George Albers, David J. Methods Inf Med Background It would be useful to be able to assess the utility of predictive models of continuous values before clinical trials are performed. Objective The aim of the study is to compare metrics to assess the potential clinical utility of models that produce continuous value forecasts. Methods We ran a set of data assimilation forecast algorithms on time series of glucose measurements from neurological intensive care unit patients. We evaluated the forecasts using four sets of metrics: glucose root mean square (RMS) error, a set of metrics on a transformed glucose value, the estimated effect on clinical care based on an insulin guideline, and a glucose measurement error grid (Parkes grid). We assessed correlation among the metrics and created a set of factor models. Results The metrics generally correlated with each other, but those that estimated the effect on clinical care correlated with others the least and were generally associated with their own independent factors. The other metrics appeared to separate into those that emphasized errors in low glucose versus errors in high glucose. The Parkes grid was well correlated with the transformed glucose but not the estimation of clinical care. Discussion Our results indicate that we need to be careful before we assume that commonly used metrics like RMS error in raw glucose or even metrics like the Parkes grid that are designed to measure importance of differences will correlate well with actual effect on clinical care processes. A combination of metrics appeared to explain the most variance between cases. As prediction algorithms move into practice, it will be important to measure actual effects. Georg Thieme Verlag KG 2022-02-23 /pmc/articles/PMC9246512/ /pubmed/35196735 http://dx.doi.org/10.1055/s-0042-1743170 Text en The Author(s). This is an open access article published by Thieme under the terms of the Creative Commons Attribution-NonDerivative-NonCommercial License, permitting copying and reproduction so long as the original work is given appropriate credit. Contents may not be used for commercial purposes, or adapted, remixed, transformed or built upon. ( https://creativecommons.org/licenses/by-nc-nd/4.0/ ) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License, which permits unrestricted reproduction and distribution, for non-commercial purposes only; and use and reproduction, but not distribution, of adapted material for non-commercial purposes only, provided the original work is properly cited. |
spellingShingle | Hripcsak, George Albers, David J. Evaluating Prediction of Continuous Clinical Values: A Glucose Case Study |
title | Evaluating Prediction of Continuous Clinical Values: A Glucose Case Study |
title_full | Evaluating Prediction of Continuous Clinical Values: A Glucose Case Study |
title_fullStr | Evaluating Prediction of Continuous Clinical Values: A Glucose Case Study |
title_full_unstemmed | Evaluating Prediction of Continuous Clinical Values: A Glucose Case Study |
title_short | Evaluating Prediction of Continuous Clinical Values: A Glucose Case Study |
title_sort | evaluating prediction of continuous clinical values: a glucose case study |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9246512/ https://www.ncbi.nlm.nih.gov/pubmed/35196735 http://dx.doi.org/10.1055/s-0042-1743170 |
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