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Vaccine Adverse Event Mining of Twitter Conversations: 2-Phase Classification Study

BACKGROUND: Traditional monitoring for adverse events following immunization (AEFI) relies on various established reporting systems, where there is inevitable lag between an AEFI occurring and its potential reporting and subsequent processing of reports. AEFI safety signal detection strives to detec...

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Detalles Bibliográficos
Autores principales: Khademi Habibabadi, Sedigheh, Delir Haghighi, Pari, Burstein, Frada, Buttery, Jim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9247809/
https://www.ncbi.nlm.nih.gov/pubmed/35708760
http://dx.doi.org/10.2196/34305
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author Khademi Habibabadi, Sedigheh
Delir Haghighi, Pari
Burstein, Frada
Buttery, Jim
author_facet Khademi Habibabadi, Sedigheh
Delir Haghighi, Pari
Burstein, Frada
Buttery, Jim
author_sort Khademi Habibabadi, Sedigheh
collection PubMed
description BACKGROUND: Traditional monitoring for adverse events following immunization (AEFI) relies on various established reporting systems, where there is inevitable lag between an AEFI occurring and its potential reporting and subsequent processing of reports. AEFI safety signal detection strives to detect AEFI as early as possible, ideally close to real time. Monitoring social media data holds promise as a resource for this. OBJECTIVE: The primary aim of this study is to investigate the utility of monitoring social media for gaining early insights into vaccine safety issues, by extracting vaccine adverse event mentions (VAEMs) from Twitter, using natural language processing techniques. The secondary aims are to document the natural language processing techniques used and identify the most effective of them for identifying tweets that contain VAEM, with a view to define an approach that might be applicable to other similar social media surveillance tasks. METHODS: A VAEM-Mine method was developed that combines topic modeling with classification techniques to extract maximal VAEM posts from a vaccine-related Twitter stream, with high degree of confidence. The approach does not require a targeted search for specific vaccine reaction–indicative words, but instead, identifies VAEM posts according to their language structure. RESULTS: The VAEM-Mine method isolated 8992 VAEMs from 811,010 vaccine-related Twitter posts and achieved an F(1) score of 0.91 in the classification phase. CONCLUSIONS: Social media can assist with the detection of vaccine safety signals as a valuable complementary source for monitoring mentions of vaccine adverse events. A social media–based VAEM data stream can be assessed for changes to detect possible emerging vaccine safety signals, helping to address the well-recognized limitations of passive reporting systems, including lack of timeliness and underreporting.
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spelling pubmed-92478092022-07-02 Vaccine Adverse Event Mining of Twitter Conversations: 2-Phase Classification Study Khademi Habibabadi, Sedigheh Delir Haghighi, Pari Burstein, Frada Buttery, Jim JMIR Med Inform Original Paper BACKGROUND: Traditional monitoring for adverse events following immunization (AEFI) relies on various established reporting systems, where there is inevitable lag between an AEFI occurring and its potential reporting and subsequent processing of reports. AEFI safety signal detection strives to detect AEFI as early as possible, ideally close to real time. Monitoring social media data holds promise as a resource for this. OBJECTIVE: The primary aim of this study is to investigate the utility of monitoring social media for gaining early insights into vaccine safety issues, by extracting vaccine adverse event mentions (VAEMs) from Twitter, using natural language processing techniques. The secondary aims are to document the natural language processing techniques used and identify the most effective of them for identifying tweets that contain VAEM, with a view to define an approach that might be applicable to other similar social media surveillance tasks. METHODS: A VAEM-Mine method was developed that combines topic modeling with classification techniques to extract maximal VAEM posts from a vaccine-related Twitter stream, with high degree of confidence. The approach does not require a targeted search for specific vaccine reaction–indicative words, but instead, identifies VAEM posts according to their language structure. RESULTS: The VAEM-Mine method isolated 8992 VAEMs from 811,010 vaccine-related Twitter posts and achieved an F(1) score of 0.91 in the classification phase. CONCLUSIONS: Social media can assist with the detection of vaccine safety signals as a valuable complementary source for monitoring mentions of vaccine adverse events. A social media–based VAEM data stream can be assessed for changes to detect possible emerging vaccine safety signals, helping to address the well-recognized limitations of passive reporting systems, including lack of timeliness and underreporting. JMIR Publications 2022-06-16 /pmc/articles/PMC9247809/ /pubmed/35708760 http://dx.doi.org/10.2196/34305 Text en ©Sedigheh Khademi Habibabadi, Pari Delir Haghighi, Frada Burstein, Jim Buttery. Originally published in JMIR Medical Informatics (https://medinform.jmir.org), 16.06.2022. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on https://medinform.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Khademi Habibabadi, Sedigheh
Delir Haghighi, Pari
Burstein, Frada
Buttery, Jim
Vaccine Adverse Event Mining of Twitter Conversations: 2-Phase Classification Study
title Vaccine Adverse Event Mining of Twitter Conversations: 2-Phase Classification Study
title_full Vaccine Adverse Event Mining of Twitter Conversations: 2-Phase Classification Study
title_fullStr Vaccine Adverse Event Mining of Twitter Conversations: 2-Phase Classification Study
title_full_unstemmed Vaccine Adverse Event Mining of Twitter Conversations: 2-Phase Classification Study
title_short Vaccine Adverse Event Mining of Twitter Conversations: 2-Phase Classification Study
title_sort vaccine adverse event mining of twitter conversations: 2-phase classification study
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9247809/
https://www.ncbi.nlm.nih.gov/pubmed/35708760
http://dx.doi.org/10.2196/34305
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