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Transcriptome analysis of the response to low temperature acclimation in Calliptamus italicus eggs
BACKGROUND: Calliptamus italicus is a dominant species in the desert and semi-desert grassland. It is widely distributed throughout many regions such as Asia, Europe, North Africa and the Mediterranean, and has enormous destructive potential for agriculture and animal husbandry. The C. italicus over...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9248191/ https://www.ncbi.nlm.nih.gov/pubmed/35778687 http://dx.doi.org/10.1186/s12864-022-08705-3 |
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author | Liu, Qian Luo, Di Wang, Mengjia Song, Xingmin Ye, Xiaofang Jashenko, Roman Ji, Rong |
author_facet | Liu, Qian Luo, Di Wang, Mengjia Song, Xingmin Ye, Xiaofang Jashenko, Roman Ji, Rong |
author_sort | Liu, Qian |
collection | PubMed |
description | BACKGROUND: Calliptamus italicus is a dominant species in the desert and semi-desert grassland. It is widely distributed throughout many regions such as Asia, Europe, North Africa and the Mediterranean, and has enormous destructive potential for agriculture and animal husbandry. The C. italicus overwintering as eggs in the soil through diapause, and the cold tolerance of locust eggs is the key to their ability to survive the winter smoothly to maintain the population. RESULTS: Transcriptome analysis of C. italicus eggs was carried out in this paper in constant low temperature acclimation, natural low temperature acclimation and room temperature. The differentially expressed genes related to cold tolerance were screened out, the differences in expression patterns under different low temperature acclimation were analyzed, and the genes in the significantly up-regulated pathways may play an important role in cold tolerance. The results show that different domestication modes can induce C. italicus eggs to express a large number of genes to alleviate low temperature damage, but C. italicus eggs are more sensitive to changes in temperature. Compared with the control, there are 8689 DEGs at constant low temperature and 14,994 DEGs at natural low temperature. KEGG analysis showed that DEGs were mainly enriched in pathways related to metabolism and biological systems under constant low temperature, and were mainly enriched in pathways related to biological systems and environmental information processing under natural low temperature. In addition, RNAi technology was used to further verify the regulation of genes in the significantly enriched up-regulated pathways on C. italicus eggs, and it was confirmed that the hatching rate of C. italicus eggs at low temperature was significantly reduced after interference. CONCLUSIONS: Transcriptome analysis of C. italicus eggs treated at different temperatures provided a theoretical basis for further understanding the adaptation mechanism of C. italicus eggs to low temperature. In addition, four potential RNAi target genes were verified in the eggs of C. italicus for the first time, providing new ideas for effective control of this species. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-022-08705-3. |
format | Online Article Text |
id | pubmed-9248191 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-92481912022-07-02 Transcriptome analysis of the response to low temperature acclimation in Calliptamus italicus eggs Liu, Qian Luo, Di Wang, Mengjia Song, Xingmin Ye, Xiaofang Jashenko, Roman Ji, Rong BMC Genomics Research BACKGROUND: Calliptamus italicus is a dominant species in the desert and semi-desert grassland. It is widely distributed throughout many regions such as Asia, Europe, North Africa and the Mediterranean, and has enormous destructive potential for agriculture and animal husbandry. The C. italicus overwintering as eggs in the soil through diapause, and the cold tolerance of locust eggs is the key to their ability to survive the winter smoothly to maintain the population. RESULTS: Transcriptome analysis of C. italicus eggs was carried out in this paper in constant low temperature acclimation, natural low temperature acclimation and room temperature. The differentially expressed genes related to cold tolerance were screened out, the differences in expression patterns under different low temperature acclimation were analyzed, and the genes in the significantly up-regulated pathways may play an important role in cold tolerance. The results show that different domestication modes can induce C. italicus eggs to express a large number of genes to alleviate low temperature damage, but C. italicus eggs are more sensitive to changes in temperature. Compared with the control, there are 8689 DEGs at constant low temperature and 14,994 DEGs at natural low temperature. KEGG analysis showed that DEGs were mainly enriched in pathways related to metabolism and biological systems under constant low temperature, and were mainly enriched in pathways related to biological systems and environmental information processing under natural low temperature. In addition, RNAi technology was used to further verify the regulation of genes in the significantly enriched up-regulated pathways on C. italicus eggs, and it was confirmed that the hatching rate of C. italicus eggs at low temperature was significantly reduced after interference. CONCLUSIONS: Transcriptome analysis of C. italicus eggs treated at different temperatures provided a theoretical basis for further understanding the adaptation mechanism of C. italicus eggs to low temperature. In addition, four potential RNAi target genes were verified in the eggs of C. italicus for the first time, providing new ideas for effective control of this species. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12864-022-08705-3. BioMed Central 2022-07-01 /pmc/articles/PMC9248191/ /pubmed/35778687 http://dx.doi.org/10.1186/s12864-022-08705-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Liu, Qian Luo, Di Wang, Mengjia Song, Xingmin Ye, Xiaofang Jashenko, Roman Ji, Rong Transcriptome analysis of the response to low temperature acclimation in Calliptamus italicus eggs |
title | Transcriptome analysis of the response to low temperature acclimation in Calliptamus italicus eggs |
title_full | Transcriptome analysis of the response to low temperature acclimation in Calliptamus italicus eggs |
title_fullStr | Transcriptome analysis of the response to low temperature acclimation in Calliptamus italicus eggs |
title_full_unstemmed | Transcriptome analysis of the response to low temperature acclimation in Calliptamus italicus eggs |
title_short | Transcriptome analysis of the response to low temperature acclimation in Calliptamus italicus eggs |
title_sort | transcriptome analysis of the response to low temperature acclimation in calliptamus italicus eggs |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9248191/ https://www.ncbi.nlm.nih.gov/pubmed/35778687 http://dx.doi.org/10.1186/s12864-022-08705-3 |
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