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The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae)
Rubus peltatus Maxim. (Bull. Acad. Imp. 1871) is a wild species endemic to East and Southeast China. However, genetic resources were unavailable for this species. It holds great potential for domestication or other breeding purposes with the extraordinary large yellow fruits. The complete chloroplas...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9248939/ https://www.ncbi.nlm.nih.gov/pubmed/35783064 http://dx.doi.org/10.1080/23802359.2022.2085529 |
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author | Qiao, Fei Guo, Wei Dai, Wenkui Huang, Weicheng Wu, Ling |
author_facet | Qiao, Fei Guo, Wei Dai, Wenkui Huang, Weicheng Wu, Ling |
author_sort | Qiao, Fei |
collection | PubMed |
description | Rubus peltatus Maxim. (Bull. Acad. Imp. 1871) is a wild species endemic to East and Southeast China. However, genetic resources were unavailable for this species. It holds great potential for domestication or other breeding purposes with the extraordinary large yellow fruits. The complete chloroplast genome sequence of R. peltatus, assembled with Illumina Hiseq X Ten platform sequencing data, was reported. The chloroplast genome was 155,582 bp in length. The large single-copy (LSC) and small single-copy (SSC) of 85,329 bp and 18,779 bp were separated by two inverted repeats (IRs) of 25,737 bp. The chloroplast genome of R. peltatus contains 130 genes, including eight transfer RNA genes, 36 ribosomal RNA genes, and 86 protein-coding genes. Phylogenetic analysis supports R. peltatus has a close relationship with the R. cochinchinensis and R. takesimensis. |
format | Online Article Text |
id | pubmed-9248939 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-92489392022-07-02 The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae) Qiao, Fei Guo, Wei Dai, Wenkui Huang, Weicheng Wu, Ling Mitochondrial DNA B Resour Mitogenome Announcement Rubus peltatus Maxim. (Bull. Acad. Imp. 1871) is a wild species endemic to East and Southeast China. However, genetic resources were unavailable for this species. It holds great potential for domestication or other breeding purposes with the extraordinary large yellow fruits. The complete chloroplast genome sequence of R. peltatus, assembled with Illumina Hiseq X Ten platform sequencing data, was reported. The chloroplast genome was 155,582 bp in length. The large single-copy (LSC) and small single-copy (SSC) of 85,329 bp and 18,779 bp were separated by two inverted repeats (IRs) of 25,737 bp. The chloroplast genome of R. peltatus contains 130 genes, including eight transfer RNA genes, 36 ribosomal RNA genes, and 86 protein-coding genes. Phylogenetic analysis supports R. peltatus has a close relationship with the R. cochinchinensis and R. takesimensis. Taylor & Francis 2022-06-29 /pmc/articles/PMC9248939/ /pubmed/35783064 http://dx.doi.org/10.1080/23802359.2022.2085529 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Qiao, Fei Guo, Wei Dai, Wenkui Huang, Weicheng Wu, Ling The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae) |
title | The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae) |
title_full | The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae) |
title_fullStr | The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae) |
title_short | The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae) |
title_sort | complete chloroplast genome sequence of rubus peltatus maxim. (rosaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9248939/ https://www.ncbi.nlm.nih.gov/pubmed/35783064 http://dx.doi.org/10.1080/23802359.2022.2085529 |
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