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The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae)

Rubus peltatus Maxim. (Bull. Acad. Imp. 1871) is a wild species endemic to East and Southeast China. However, genetic resources were unavailable for this species. It holds great potential for domestication or other breeding purposes with the extraordinary large yellow fruits. The complete chloroplas...

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Autores principales: Qiao, Fei, Guo, Wei, Dai, Wenkui, Huang, Weicheng, Wu, Ling
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9248939/
https://www.ncbi.nlm.nih.gov/pubmed/35783064
http://dx.doi.org/10.1080/23802359.2022.2085529
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author Qiao, Fei
Guo, Wei
Dai, Wenkui
Huang, Weicheng
Wu, Ling
author_facet Qiao, Fei
Guo, Wei
Dai, Wenkui
Huang, Weicheng
Wu, Ling
author_sort Qiao, Fei
collection PubMed
description Rubus peltatus Maxim. (Bull. Acad. Imp. 1871) is a wild species endemic to East and Southeast China. However, genetic resources were unavailable for this species. It holds great potential for domestication or other breeding purposes with the extraordinary large yellow fruits. The complete chloroplast genome sequence of R. peltatus, assembled with Illumina Hiseq X Ten platform sequencing data, was reported. The chloroplast genome was 155,582 bp in length. The large single-copy (LSC) and small single-copy (SSC) of 85,329 bp and 18,779 bp were separated by two inverted repeats (IRs) of 25,737 bp. The chloroplast genome of R. peltatus contains 130 genes, including eight transfer RNA genes, 36 ribosomal RNA genes, and 86 protein-coding genes. Phylogenetic analysis supports R. peltatus has a close relationship with the R. cochinchinensis and R. takesimensis.
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spelling pubmed-92489392022-07-02 The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae) Qiao, Fei Guo, Wei Dai, Wenkui Huang, Weicheng Wu, Ling Mitochondrial DNA B Resour Mitogenome Announcement Rubus peltatus Maxim. (Bull. Acad. Imp. 1871) is a wild species endemic to East and Southeast China. However, genetic resources were unavailable for this species. It holds great potential for domestication or other breeding purposes with the extraordinary large yellow fruits. The complete chloroplast genome sequence of R. peltatus, assembled with Illumina Hiseq X Ten platform sequencing data, was reported. The chloroplast genome was 155,582 bp in length. The large single-copy (LSC) and small single-copy (SSC) of 85,329 bp and 18,779 bp were separated by two inverted repeats (IRs) of 25,737 bp. The chloroplast genome of R. peltatus contains 130 genes, including eight transfer RNA genes, 36 ribosomal RNA genes, and 86 protein-coding genes. Phylogenetic analysis supports R. peltatus has a close relationship with the R. cochinchinensis and R. takesimensis. Taylor & Francis 2022-06-29 /pmc/articles/PMC9248939/ /pubmed/35783064 http://dx.doi.org/10.1080/23802359.2022.2085529 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Qiao, Fei
Guo, Wei
Dai, Wenkui
Huang, Weicheng
Wu, Ling
The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae)
title The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae)
title_full The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae)
title_fullStr The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae)
title_full_unstemmed The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae)
title_short The complete chloroplast genome sequence of Rubus peltatus Maxim. (Rosaceae)
title_sort complete chloroplast genome sequence of rubus peltatus maxim. (rosaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9248939/
https://www.ncbi.nlm.nih.gov/pubmed/35783064
http://dx.doi.org/10.1080/23802359.2022.2085529
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