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The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China

Coreoperca liui as an approximate species of the genus Siniperca, provides an important source for the genetic diversity of the mandarin fish, which is valuable for the protection of biodiversity and utilization of germplasm resources. The complete mitochondrial genome of C. liui is 16,482 bp long a...

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Autores principales: Guan, Fangyuan, Sheng, Qiang, Zhang, Yixiang, Lv, He, Wang, Yingying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9248940/
https://www.ncbi.nlm.nih.gov/pubmed/35783049
http://dx.doi.org/10.1080/23802359.2022.2086081
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author Guan, Fangyuan
Sheng, Qiang
Zhang, Yixiang
Lv, He
Wang, Yingying
author_facet Guan, Fangyuan
Sheng, Qiang
Zhang, Yixiang
Lv, He
Wang, Yingying
author_sort Guan, Fangyuan
collection PubMed
description Coreoperca liui as an approximate species of the genus Siniperca, provides an important source for the genetic diversity of the mandarin fish, which is valuable for the protection of biodiversity and utilization of germplasm resources. The complete mitochondrial genome of C. liui is 16,482 bp long and it consists of 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA genes, and a control region (D-loop). Phylogenetic analysis using the maximum-likelihood method, based on 13 PCGs and two rRNA from 13 species produced three major clades. The phylogenetic tree showed that C. liui is most closely related to Coreoperca whiteheadi. Our results provide useful information for understanding the phylogeny of the genus Coreoperca, as well as for conducing conservation studies of Sinipercidae and related species.
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spelling pubmed-92489402022-07-02 The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China Guan, Fangyuan Sheng, Qiang Zhang, Yixiang Lv, He Wang, Yingying Mitochondrial DNA B Resour Mitogenome Announcement Coreoperca liui as an approximate species of the genus Siniperca, provides an important source for the genetic diversity of the mandarin fish, which is valuable for the protection of biodiversity and utilization of germplasm resources. The complete mitochondrial genome of C. liui is 16,482 bp long and it consists of 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA genes, and a control region (D-loop). Phylogenetic analysis using the maximum-likelihood method, based on 13 PCGs and two rRNA from 13 species produced three major clades. The phylogenetic tree showed that C. liui is most closely related to Coreoperca whiteheadi. Our results provide useful information for understanding the phylogeny of the genus Coreoperca, as well as for conducing conservation studies of Sinipercidae and related species. Taylor & Francis 2022-06-30 /pmc/articles/PMC9248940/ /pubmed/35783049 http://dx.doi.org/10.1080/23802359.2022.2086081 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Guan, Fangyuan
Sheng, Qiang
Zhang, Yixiang
Lv, He
Wang, Yingying
The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China
title The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China
title_full The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China
title_fullStr The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China
title_full_unstemmed The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China
title_short The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China
title_sort complete mitochondrial genome of a vulnerable mandarin fish coreoperca liui (teleostei: perciformes: serranidae) from qiandaohu lake in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9248940/
https://www.ncbi.nlm.nih.gov/pubmed/35783049
http://dx.doi.org/10.1080/23802359.2022.2086081
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