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The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China
Coreoperca liui as an approximate species of the genus Siniperca, provides an important source for the genetic diversity of the mandarin fish, which is valuable for the protection of biodiversity and utilization of germplasm resources. The complete mitochondrial genome of C. liui is 16,482 bp long a...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9248940/ https://www.ncbi.nlm.nih.gov/pubmed/35783049 http://dx.doi.org/10.1080/23802359.2022.2086081 |
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author | Guan, Fangyuan Sheng, Qiang Zhang, Yixiang Lv, He Wang, Yingying |
author_facet | Guan, Fangyuan Sheng, Qiang Zhang, Yixiang Lv, He Wang, Yingying |
author_sort | Guan, Fangyuan |
collection | PubMed |
description | Coreoperca liui as an approximate species of the genus Siniperca, provides an important source for the genetic diversity of the mandarin fish, which is valuable for the protection of biodiversity and utilization of germplasm resources. The complete mitochondrial genome of C. liui is 16,482 bp long and it consists of 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA genes, and a control region (D-loop). Phylogenetic analysis using the maximum-likelihood method, based on 13 PCGs and two rRNA from 13 species produced three major clades. The phylogenetic tree showed that C. liui is most closely related to Coreoperca whiteheadi. Our results provide useful information for understanding the phylogeny of the genus Coreoperca, as well as for conducing conservation studies of Sinipercidae and related species. |
format | Online Article Text |
id | pubmed-9248940 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-92489402022-07-02 The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China Guan, Fangyuan Sheng, Qiang Zhang, Yixiang Lv, He Wang, Yingying Mitochondrial DNA B Resour Mitogenome Announcement Coreoperca liui as an approximate species of the genus Siniperca, provides an important source for the genetic diversity of the mandarin fish, which is valuable for the protection of biodiversity and utilization of germplasm resources. The complete mitochondrial genome of C. liui is 16,482 bp long and it consists of 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA genes, and a control region (D-loop). Phylogenetic analysis using the maximum-likelihood method, based on 13 PCGs and two rRNA from 13 species produced three major clades. The phylogenetic tree showed that C. liui is most closely related to Coreoperca whiteheadi. Our results provide useful information for understanding the phylogeny of the genus Coreoperca, as well as for conducing conservation studies of Sinipercidae and related species. Taylor & Francis 2022-06-30 /pmc/articles/PMC9248940/ /pubmed/35783049 http://dx.doi.org/10.1080/23802359.2022.2086081 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Guan, Fangyuan Sheng, Qiang Zhang, Yixiang Lv, He Wang, Yingying The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China |
title | The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China |
title_full | The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China |
title_fullStr | The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China |
title_full_unstemmed | The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China |
title_short | The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China |
title_sort | complete mitochondrial genome of a vulnerable mandarin fish coreoperca liui (teleostei: perciformes: serranidae) from qiandaohu lake in china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9248940/ https://www.ncbi.nlm.nih.gov/pubmed/35783049 http://dx.doi.org/10.1080/23802359.2022.2086081 |
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