The complete chloroplast genome of Epimedium trifoliolatobinatum (Koidz.) Koidz. (Berberidaceae)

Epimedium L. is an important genus in the family Berberidaceae. Epimedium trifoliolatobinatum (Koidz.) Koidz. 1939 is inhabited on the west side of the Shikoku, Japan. In this study, the first complete chloroplast genome of E. trifoliolatobinatum was assembled with Illumina paired-end sequencing dat...

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Autores principales: Zhang, Yixin, Liu, Xiang, Zhang, Cheng, Xu, Chaoqun, Suo, Fengmei, Qin, Weihan, Shen, Guoan, Guo, Baolin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9248944/
https://www.ncbi.nlm.nih.gov/pubmed/35783043
http://dx.doi.org/10.1080/23802359.2022.2086079
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author Zhang, Yixin
Liu, Xiang
Zhang, Cheng
Xu, Chaoqun
Suo, Fengmei
Qin, Weihan
Shen, Guoan
Guo, Baolin
author_facet Zhang, Yixin
Liu, Xiang
Zhang, Cheng
Xu, Chaoqun
Suo, Fengmei
Qin, Weihan
Shen, Guoan
Guo, Baolin
author_sort Zhang, Yixin
collection PubMed
description Epimedium L. is an important genus in the family Berberidaceae. Epimedium trifoliolatobinatum (Koidz.) Koidz. 1939 is inhabited on the west side of the Shikoku, Japan. In this study, the first complete chloroplast genome of E. trifoliolatobinatum was assembled with Illumina paired-end sequencing data, which was 157,272 bp in length with a total GC content of 38.70%. A total of 112 unique genes were annotated, comprising 78 protein-coding genes, 30 tRNA genes, and four rRNA genes. The phylogenetic analysis suggested that E. trifoliolatobinatum was sister to E. koreanum. The current results provided fundamental information for further conducting molecular systematics and phylogenetic research of Epimedium genus.
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spelling pubmed-92489442022-07-02 The complete chloroplast genome of Epimedium trifoliolatobinatum (Koidz.) Koidz. (Berberidaceae) Zhang, Yixin Liu, Xiang Zhang, Cheng Xu, Chaoqun Suo, Fengmei Qin, Weihan Shen, Guoan Guo, Baolin Mitochondrial DNA B Resour Plastome Announcement Epimedium L. is an important genus in the family Berberidaceae. Epimedium trifoliolatobinatum (Koidz.) Koidz. 1939 is inhabited on the west side of the Shikoku, Japan. In this study, the first complete chloroplast genome of E. trifoliolatobinatum was assembled with Illumina paired-end sequencing data, which was 157,272 bp in length with a total GC content of 38.70%. A total of 112 unique genes were annotated, comprising 78 protein-coding genes, 30 tRNA genes, and four rRNA genes. The phylogenetic analysis suggested that E. trifoliolatobinatum was sister to E. koreanum. The current results provided fundamental information for further conducting molecular systematics and phylogenetic research of Epimedium genus. Taylor & Francis 2022-06-30 /pmc/articles/PMC9248944/ /pubmed/35783043 http://dx.doi.org/10.1080/23802359.2022.2086079 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Zhang, Yixin
Liu, Xiang
Zhang, Cheng
Xu, Chaoqun
Suo, Fengmei
Qin, Weihan
Shen, Guoan
Guo, Baolin
The complete chloroplast genome of Epimedium trifoliolatobinatum (Koidz.) Koidz. (Berberidaceae)
title The complete chloroplast genome of Epimedium trifoliolatobinatum (Koidz.) Koidz. (Berberidaceae)
title_full The complete chloroplast genome of Epimedium trifoliolatobinatum (Koidz.) Koidz. (Berberidaceae)
title_fullStr The complete chloroplast genome of Epimedium trifoliolatobinatum (Koidz.) Koidz. (Berberidaceae)
title_full_unstemmed The complete chloroplast genome of Epimedium trifoliolatobinatum (Koidz.) Koidz. (Berberidaceae)
title_short The complete chloroplast genome of Epimedium trifoliolatobinatum (Koidz.) Koidz. (Berberidaceae)
title_sort complete chloroplast genome of epimedium trifoliolatobinatum (koidz.) koidz. (berberidaceae)
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9248944/
https://www.ncbi.nlm.nih.gov/pubmed/35783043
http://dx.doi.org/10.1080/23802359.2022.2086079
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