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PSHG-TISS: A collection of polarization-resolved second harmonic generation microscopy images of fixed tissues

Second harmonic generation (SHG) microscopy is acknowledged as an established imaging technique capable to provide information on the collagen architecture in tissues that is highly valuable for the diagnostics of various pathologies. The polarization-resolved extension of SHG (PSHG) microscopy, tog...

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Autores principales: Hristu, Radu, Stanciu, Stefan G., Dumitru, Adrian, Eftimie, Lucian G., Paun, Bogdan, Tranca, Denis E., Gheorghita, Pavel, Costache, Mariana, Stanciu, George A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9250519/
https://www.ncbi.nlm.nih.gov/pubmed/35780180
http://dx.doi.org/10.1038/s41597-022-01477-1
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author Hristu, Radu
Stanciu, Stefan G.
Dumitru, Adrian
Eftimie, Lucian G.
Paun, Bogdan
Tranca, Denis E.
Gheorghita, Pavel
Costache, Mariana
Stanciu, George A.
author_facet Hristu, Radu
Stanciu, Stefan G.
Dumitru, Adrian
Eftimie, Lucian G.
Paun, Bogdan
Tranca, Denis E.
Gheorghita, Pavel
Costache, Mariana
Stanciu, George A.
author_sort Hristu, Radu
collection PubMed
description Second harmonic generation (SHG) microscopy is acknowledged as an established imaging technique capable to provide information on the collagen architecture in tissues that is highly valuable for the diagnostics of various pathologies. The polarization-resolved extension of SHG (PSHG) microscopy, together with associated image processing methods, retrieves extensive image sets under different input polarization settings, which are not fully exploited in clinical settings. To facilitate this, we introduce PSHG-TISS, a collection of PSHG images, accompanied by additional computationally generated images which can be used to complement the subjective qualitative analysis of SHG images. These latter have been calculated using the single-axis molecule model for collagen and provide 2D representations of different specific PSHG parameters known to account for the collagen structure and distribution. PSHG-TISS can aid refining existing PSHG image analysis methods, while also supporting the development of novel image processing and analysis methods capable to extract meaningful quantitative data from the raw PSHG image sets. PSHG-TISS can facilitate the breadth and widespread of PSHG applications in tissue analysis and diagnostics.
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spelling pubmed-92505192022-07-04 PSHG-TISS: A collection of polarization-resolved second harmonic generation microscopy images of fixed tissues Hristu, Radu Stanciu, Stefan G. Dumitru, Adrian Eftimie, Lucian G. Paun, Bogdan Tranca, Denis E. Gheorghita, Pavel Costache, Mariana Stanciu, George A. Sci Data Data Descriptor Second harmonic generation (SHG) microscopy is acknowledged as an established imaging technique capable to provide information on the collagen architecture in tissues that is highly valuable for the diagnostics of various pathologies. The polarization-resolved extension of SHG (PSHG) microscopy, together with associated image processing methods, retrieves extensive image sets under different input polarization settings, which are not fully exploited in clinical settings. To facilitate this, we introduce PSHG-TISS, a collection of PSHG images, accompanied by additional computationally generated images which can be used to complement the subjective qualitative analysis of SHG images. These latter have been calculated using the single-axis molecule model for collagen and provide 2D representations of different specific PSHG parameters known to account for the collagen structure and distribution. PSHG-TISS can aid refining existing PSHG image analysis methods, while also supporting the development of novel image processing and analysis methods capable to extract meaningful quantitative data from the raw PSHG image sets. PSHG-TISS can facilitate the breadth and widespread of PSHG applications in tissue analysis and diagnostics. Nature Publishing Group UK 2022-07-02 /pmc/articles/PMC9250519/ /pubmed/35780180 http://dx.doi.org/10.1038/s41597-022-01477-1 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Data Descriptor
Hristu, Radu
Stanciu, Stefan G.
Dumitru, Adrian
Eftimie, Lucian G.
Paun, Bogdan
Tranca, Denis E.
Gheorghita, Pavel
Costache, Mariana
Stanciu, George A.
PSHG-TISS: A collection of polarization-resolved second harmonic generation microscopy images of fixed tissues
title PSHG-TISS: A collection of polarization-resolved second harmonic generation microscopy images of fixed tissues
title_full PSHG-TISS: A collection of polarization-resolved second harmonic generation microscopy images of fixed tissues
title_fullStr PSHG-TISS: A collection of polarization-resolved second harmonic generation microscopy images of fixed tissues
title_full_unstemmed PSHG-TISS: A collection of polarization-resolved second harmonic generation microscopy images of fixed tissues
title_short PSHG-TISS: A collection of polarization-resolved second harmonic generation microscopy images of fixed tissues
title_sort pshg-tiss: a collection of polarization-resolved second harmonic generation microscopy images of fixed tissues
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9250519/
https://www.ncbi.nlm.nih.gov/pubmed/35780180
http://dx.doi.org/10.1038/s41597-022-01477-1
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