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Machine learning approach for the prediction of 30-day mortality in patients with sepsis-associated encephalopathy
OBJECTIVE: Our study aimed to identify predictors as well as develop machine learning (ML) models to predict the risk of 30-day mortality in patients with sepsis-associated encephalopathy (SAE). MATERIALS AND METHODS: ML models were developed and validated based on a public database named Medical In...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9252033/ https://www.ncbi.nlm.nih.gov/pubmed/35787248 http://dx.doi.org/10.1186/s12874-022-01664-z |
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author | Peng, Liwei Peng, Chi Yang, Fan Wang, Jian Zuo, Wei Cheng, Chao Mao, Zilong Jin, Zhichao Li, Weixin |
author_facet | Peng, Liwei Peng, Chi Yang, Fan Wang, Jian Zuo, Wei Cheng, Chao Mao, Zilong Jin, Zhichao Li, Weixin |
author_sort | Peng, Liwei |
collection | PubMed |
description | OBJECTIVE: Our study aimed to identify predictors as well as develop machine learning (ML) models to predict the risk of 30-day mortality in patients with sepsis-associated encephalopathy (SAE). MATERIALS AND METHODS: ML models were developed and validated based on a public database named Medical Information Mart for Intensive Care (MIMIC)-IV. Models were compared by the area under the curve (AUC), accuracy, sensitivity, specificity, positive and negative predictive values, and Hosmer–Lemeshow good of fit test. RESULTS: Of 6994 patients in MIMIC-IV included in the final cohort, a total of 1232 (17.62%) patients died following SAE. Recursive feature elimination (RFE) selected 15 variables, including acute physiology score III (APSIII), Glasgow coma score (GCS), sepsis related organ failure assessment (SOFA), Charlson comorbidity index (CCI), red blood cell volume distribution width (RDW), blood urea nitrogen (BUN), age, respiratory rate, PaO(2), temperature, lactate, creatinine (CRE), malignant cancer, metastatic solid tumor, and platelet (PLT). The validation cohort demonstrated all ML approaches had higher discriminative ability compared with the bagged trees (BT) model, although the difference was not statistically significant. Furthermore, in terms of the calibration performance, the artificial neural network (NNET), logistic regression (LR), and adapting boosting (Ada) models had a good calibration—namely, a high accuracy of prediction, with P-values of 0.831, 0.119, and 0.129, respectively. CONCLUSIONS: The ML models, as demonstrated by our study, can be used to evaluate the prognosis of SAE patients in the intensive care unit (ICU). Online calculator could facilitate the sharing of predictive models. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-022-01664-z. |
format | Online Article Text |
id | pubmed-9252033 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-92520332022-07-05 Machine learning approach for the prediction of 30-day mortality in patients with sepsis-associated encephalopathy Peng, Liwei Peng, Chi Yang, Fan Wang, Jian Zuo, Wei Cheng, Chao Mao, Zilong Jin, Zhichao Li, Weixin BMC Med Res Methodol Research OBJECTIVE: Our study aimed to identify predictors as well as develop machine learning (ML) models to predict the risk of 30-day mortality in patients with sepsis-associated encephalopathy (SAE). MATERIALS AND METHODS: ML models were developed and validated based on a public database named Medical Information Mart for Intensive Care (MIMIC)-IV. Models were compared by the area under the curve (AUC), accuracy, sensitivity, specificity, positive and negative predictive values, and Hosmer–Lemeshow good of fit test. RESULTS: Of 6994 patients in MIMIC-IV included in the final cohort, a total of 1232 (17.62%) patients died following SAE. Recursive feature elimination (RFE) selected 15 variables, including acute physiology score III (APSIII), Glasgow coma score (GCS), sepsis related organ failure assessment (SOFA), Charlson comorbidity index (CCI), red blood cell volume distribution width (RDW), blood urea nitrogen (BUN), age, respiratory rate, PaO(2), temperature, lactate, creatinine (CRE), malignant cancer, metastatic solid tumor, and platelet (PLT). The validation cohort demonstrated all ML approaches had higher discriminative ability compared with the bagged trees (BT) model, although the difference was not statistically significant. Furthermore, in terms of the calibration performance, the artificial neural network (NNET), logistic regression (LR), and adapting boosting (Ada) models had a good calibration—namely, a high accuracy of prediction, with P-values of 0.831, 0.119, and 0.129, respectively. CONCLUSIONS: The ML models, as demonstrated by our study, can be used to evaluate the prognosis of SAE patients in the intensive care unit (ICU). Online calculator could facilitate the sharing of predictive models. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-022-01664-z. BioMed Central 2022-07-04 /pmc/articles/PMC9252033/ /pubmed/35787248 http://dx.doi.org/10.1186/s12874-022-01664-z Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Peng, Liwei Peng, Chi Yang, Fan Wang, Jian Zuo, Wei Cheng, Chao Mao, Zilong Jin, Zhichao Li, Weixin Machine learning approach for the prediction of 30-day mortality in patients with sepsis-associated encephalopathy |
title | Machine learning approach for the prediction of 30-day mortality in patients with sepsis-associated encephalopathy |
title_full | Machine learning approach for the prediction of 30-day mortality in patients with sepsis-associated encephalopathy |
title_fullStr | Machine learning approach for the prediction of 30-day mortality in patients with sepsis-associated encephalopathy |
title_full_unstemmed | Machine learning approach for the prediction of 30-day mortality in patients with sepsis-associated encephalopathy |
title_short | Machine learning approach for the prediction of 30-day mortality in patients with sepsis-associated encephalopathy |
title_sort | machine learning approach for the prediction of 30-day mortality in patients with sepsis-associated encephalopathy |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9252033/ https://www.ncbi.nlm.nih.gov/pubmed/35787248 http://dx.doi.org/10.1186/s12874-022-01664-z |
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