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Influence of modelling disorder on Hirshfeld atom refinement results of an organo-gold(I) compound

Details of the validation of disorder modelling with Hirshfeld atom refinement (HAR) for a previously investigated organo-gold(I) compound are presented here. The impact of refining disorder on HAR results is discussed using an analysis of the differences of dynamic structure factors. These dynamic...

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Autores principales: Pawlędzio, Sylwia, Malinska, Maura, Kleemiss, Florian, Grabowsky, Simon, Woźniak, Krzysztof
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9252150/
https://www.ncbi.nlm.nih.gov/pubmed/35844484
http://dx.doi.org/10.1107/S2052252522005309
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author Pawlędzio, Sylwia
Malinska, Maura
Kleemiss, Florian
Grabowsky, Simon
Woźniak, Krzysztof
author_facet Pawlędzio, Sylwia
Malinska, Maura
Kleemiss, Florian
Grabowsky, Simon
Woźniak, Krzysztof
author_sort Pawlędzio, Sylwia
collection PubMed
description Details of the validation of disorder modelling with Hirshfeld atom refinement (HAR) for a previously investigated organo-gold(I) compound are presented here. The impact of refining disorder on HAR results is discussed using an analysis of the differences of dynamic structure factors. These dynamic structure factor differences are calculated from thermally smeared quantum mechanical electron densities based on wavefunctions that include or exclude electron correlation and relativistic effects. When disorder is modelled, the electron densities stem from a weighted superposition of two (or more) different conformers. Here this is shown to impact the relative importance of electron correlation and relativistic effect estimates expressed by the structure factor magnitudes. The role of disorder modelling is also compared with the effect of the treatment of hydrogen anisotropic displacement parameter (ADP) values and atomic anharmonicity of the gold atom. The analysis of ADP values of gold and disordered carbon atoms showed that the effect of disorder significantly altered carbon ADP values and did not influence those of the gold atom.
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spelling pubmed-92521502022-07-14 Influence of modelling disorder on Hirshfeld atom refinement results of an organo-gold(I) compound Pawlędzio, Sylwia Malinska, Maura Kleemiss, Florian Grabowsky, Simon Woźniak, Krzysztof IUCrJ Research Papers Details of the validation of disorder modelling with Hirshfeld atom refinement (HAR) for a previously investigated organo-gold(I) compound are presented here. The impact of refining disorder on HAR results is discussed using an analysis of the differences of dynamic structure factors. These dynamic structure factor differences are calculated from thermally smeared quantum mechanical electron densities based on wavefunctions that include or exclude electron correlation and relativistic effects. When disorder is modelled, the electron densities stem from a weighted superposition of two (or more) different conformers. Here this is shown to impact the relative importance of electron correlation and relativistic effect estimates expressed by the structure factor magnitudes. The role of disorder modelling is also compared with the effect of the treatment of hydrogen anisotropic displacement parameter (ADP) values and atomic anharmonicity of the gold atom. The analysis of ADP values of gold and disordered carbon atoms showed that the effect of disorder significantly altered carbon ADP values and did not influence those of the gold atom. International Union of Crystallography 2022-06-11 /pmc/articles/PMC9252150/ /pubmed/35844484 http://dx.doi.org/10.1107/S2052252522005309 Text en © Sylwia Pawlędzio et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Pawlędzio, Sylwia
Malinska, Maura
Kleemiss, Florian
Grabowsky, Simon
Woźniak, Krzysztof
Influence of modelling disorder on Hirshfeld atom refinement results of an organo-gold(I) compound
title Influence of modelling disorder on Hirshfeld atom refinement results of an organo-gold(I) compound
title_full Influence of modelling disorder on Hirshfeld atom refinement results of an organo-gold(I) compound
title_fullStr Influence of modelling disorder on Hirshfeld atom refinement results of an organo-gold(I) compound
title_full_unstemmed Influence of modelling disorder on Hirshfeld atom refinement results of an organo-gold(I) compound
title_short Influence of modelling disorder on Hirshfeld atom refinement results of an organo-gold(I) compound
title_sort influence of modelling disorder on hirshfeld atom refinement results of an organo-gold(i) compound
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9252150/
https://www.ncbi.nlm.nih.gov/pubmed/35844484
http://dx.doi.org/10.1107/S2052252522005309
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