Cargando…

The CirCor DigiScope Dataset: From Murmur Detection to Murmur Classification

Cardiac auscultation is one of the most cost-effective techniques used to detect and identify many heart conditions. Computer-assisted decision systems based on auscultation can support physicians in their decisions. Unfortunately, the application of such systems in clinical trials is still minimal...

Descripción completa

Detalles Bibliográficos
Autores principales: Oliveira, Jorge, Renna, Francesco, Costa, Paulo Dias, Nogueira, Marcelo, Oliveira, Cristina, Ferreira, Carlos, Jorge, Alípio, Mattos, Sandra, Hatem, Thamine, Tavares, Thiago, Elola, Andoni, Rad, Ali Bahrami, Sameni, Reza, Clifford, Gari D., Coimbra, Miguel T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9253493/
https://www.ncbi.nlm.nih.gov/pubmed/34932490
http://dx.doi.org/10.1109/JBHI.2021.3137048
_version_ 1784740499882508288
author Oliveira, Jorge
Renna, Francesco
Costa, Paulo Dias
Nogueira, Marcelo
Oliveira, Cristina
Ferreira, Carlos
Jorge, Alípio
Mattos, Sandra
Hatem, Thamine
Tavares, Thiago
Elola, Andoni
Rad, Ali Bahrami
Sameni, Reza
Clifford, Gari D.
Coimbra, Miguel T.
author_facet Oliveira, Jorge
Renna, Francesco
Costa, Paulo Dias
Nogueira, Marcelo
Oliveira, Cristina
Ferreira, Carlos
Jorge, Alípio
Mattos, Sandra
Hatem, Thamine
Tavares, Thiago
Elola, Andoni
Rad, Ali Bahrami
Sameni, Reza
Clifford, Gari D.
Coimbra, Miguel T.
author_sort Oliveira, Jorge
collection PubMed
description Cardiac auscultation is one of the most cost-effective techniques used to detect and identify many heart conditions. Computer-assisted decision systems based on auscultation can support physicians in their decisions. Unfortunately, the application of such systems in clinical trials is still minimal since most of them only aim to detect the presence of extra or abnormal waves in the phonocardiogram signal, i.e., only a binary ground truth variable (normal vs abnormal) is provided. This is mainly due to the lack of large publicly available datasets, where a more detailed description of such abnormal waves (e.g., cardiac murmurs) exists. To pave the way to more effective research on healthcare recommendation systems based on auscultation, our team has prepared the currently largest pediatric heart sound dataset. A total of 5282 recordings have been collected from the four main auscultation locations of 1568 patients, in the process, 215780 heart sounds have been manually annotated. Furthermore, and for the first time, each cardiac murmur has been manually annotated by an expert annotator according to its timing, shape, pitch, grading, and quality. In addition, the auscultation locations where the murmur is present were identified as well as the auscultation location where the murmur is detected more intensively. Such detailed description for a relatively large number of heart sounds may pave the way for new machine learning algorithms with a real-world application for the detection and analysis of murmur waves for diagnostic purposes.
format Online
Article
Text
id pubmed-9253493
institution National Center for Biotechnology Information
language English
publishDate 2022
record_format MEDLINE/PubMed
spelling pubmed-92534932022-07-05 The CirCor DigiScope Dataset: From Murmur Detection to Murmur Classification Oliveira, Jorge Renna, Francesco Costa, Paulo Dias Nogueira, Marcelo Oliveira, Cristina Ferreira, Carlos Jorge, Alípio Mattos, Sandra Hatem, Thamine Tavares, Thiago Elola, Andoni Rad, Ali Bahrami Sameni, Reza Clifford, Gari D. Coimbra, Miguel T. IEEE J Biomed Health Inform Article Cardiac auscultation is one of the most cost-effective techniques used to detect and identify many heart conditions. Computer-assisted decision systems based on auscultation can support physicians in their decisions. Unfortunately, the application of such systems in clinical trials is still minimal since most of them only aim to detect the presence of extra or abnormal waves in the phonocardiogram signal, i.e., only a binary ground truth variable (normal vs abnormal) is provided. This is mainly due to the lack of large publicly available datasets, where a more detailed description of such abnormal waves (e.g., cardiac murmurs) exists. To pave the way to more effective research on healthcare recommendation systems based on auscultation, our team has prepared the currently largest pediatric heart sound dataset. A total of 5282 recordings have been collected from the four main auscultation locations of 1568 patients, in the process, 215780 heart sounds have been manually annotated. Furthermore, and for the first time, each cardiac murmur has been manually annotated by an expert annotator according to its timing, shape, pitch, grading, and quality. In addition, the auscultation locations where the murmur is present were identified as well as the auscultation location where the murmur is detected more intensively. Such detailed description for a relatively large number of heart sounds may pave the way for new machine learning algorithms with a real-world application for the detection and analysis of murmur waves for diagnostic purposes. 2022-06 2022-06-03 /pmc/articles/PMC9253493/ /pubmed/34932490 http://dx.doi.org/10.1109/JBHI.2021.3137048 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 License. For more information, see https://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Oliveira, Jorge
Renna, Francesco
Costa, Paulo Dias
Nogueira, Marcelo
Oliveira, Cristina
Ferreira, Carlos
Jorge, Alípio
Mattos, Sandra
Hatem, Thamine
Tavares, Thiago
Elola, Andoni
Rad, Ali Bahrami
Sameni, Reza
Clifford, Gari D.
Coimbra, Miguel T.
The CirCor DigiScope Dataset: From Murmur Detection to Murmur Classification
title The CirCor DigiScope Dataset: From Murmur Detection to Murmur Classification
title_full The CirCor DigiScope Dataset: From Murmur Detection to Murmur Classification
title_fullStr The CirCor DigiScope Dataset: From Murmur Detection to Murmur Classification
title_full_unstemmed The CirCor DigiScope Dataset: From Murmur Detection to Murmur Classification
title_short The CirCor DigiScope Dataset: From Murmur Detection to Murmur Classification
title_sort circor digiscope dataset: from murmur detection to murmur classification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9253493/
https://www.ncbi.nlm.nih.gov/pubmed/34932490
http://dx.doi.org/10.1109/JBHI.2021.3137048
work_keys_str_mv AT oliveirajorge thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT rennafrancesco thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT costapaulodias thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT nogueiramarcelo thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT oliveiracristina thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT ferreiracarlos thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT jorgealipio thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT mattossandra thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT hatemthamine thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT tavaresthiago thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT elolaandoni thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT radalibahrami thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT samenireza thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT cliffordgarid thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT coimbramiguelt thecircordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT oliveirajorge circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT rennafrancesco circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT costapaulodias circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT nogueiramarcelo circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT oliveiracristina circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT ferreiracarlos circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT jorgealipio circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT mattossandra circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT hatemthamine circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT tavaresthiago circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT elolaandoni circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT radalibahrami circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT samenireza circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT cliffordgarid circordigiscopedatasetfrommurmurdetectiontomurmurclassification
AT coimbramiguelt circordigiscopedatasetfrommurmurdetectiontomurmurclassification