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Loop-mediated isothermal amplification (LAMP) for rapid and easy identification of Omphalotus japonicus

Omphalotus japonicus is a major toxic mushroom in Japan. When food poisoning caused by O. japonicus occurs, quick and accurate identification using a method that does not rely on morphological discrimination is required. Because the loop-mediated isothermal amplification (LAMP) method meets these re...

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Detalles Bibliográficos
Autores principales: Sugano, Yohei, Sakata, Kozue, Nakamura, Kosuke, Hosokawa, Aoi, Kouguchi, Hirokazu, Suzuki, Tomohiro, Kondo, Kazunari
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9253582/
https://www.ncbi.nlm.nih.gov/pubmed/35800296
http://dx.doi.org/10.1016/j.fochms.2022.100115
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author Sugano, Yohei
Sakata, Kozue
Nakamura, Kosuke
Hosokawa, Aoi
Kouguchi, Hirokazu
Suzuki, Tomohiro
Kondo, Kazunari
author_facet Sugano, Yohei
Sakata, Kozue
Nakamura, Kosuke
Hosokawa, Aoi
Kouguchi, Hirokazu
Suzuki, Tomohiro
Kondo, Kazunari
author_sort Sugano, Yohei
collection PubMed
description Omphalotus japonicus is a major toxic mushroom in Japan. When food poisoning caused by O. japonicus occurs, quick and accurate identification using a method that does not rely on morphological discrimination is required. Because the loop-mediated isothermal amplification (LAMP) method meets these requirements, we developed a LAMP method for detecting O. japonicus. Amplification occurred within 60 min, and the presence or absence of O. japonicus was confirmed within 2 h, including the DNA extraction protocol. The LAMP method did not show cross-reactivity with 13 species of edible mushrooms, had high specificity toward O. japonicus, and had sufficient detection sensitivity even in a mixed mushroom sample containing 1% O. japonicus. Additionally, O. japonicus could be detected in simulated food poisoning samples of heated and digested mushrooms, and in actual food poisoning residual samples.
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spelling pubmed-92535822022-07-06 Loop-mediated isothermal amplification (LAMP) for rapid and easy identification of Omphalotus japonicus Sugano, Yohei Sakata, Kozue Nakamura, Kosuke Hosokawa, Aoi Kouguchi, Hirokazu Suzuki, Tomohiro Kondo, Kazunari Food Chem (Oxf) Research Article Omphalotus japonicus is a major toxic mushroom in Japan. When food poisoning caused by O. japonicus occurs, quick and accurate identification using a method that does not rely on morphological discrimination is required. Because the loop-mediated isothermal amplification (LAMP) method meets these requirements, we developed a LAMP method for detecting O. japonicus. Amplification occurred within 60 min, and the presence or absence of O. japonicus was confirmed within 2 h, including the DNA extraction protocol. The LAMP method did not show cross-reactivity with 13 species of edible mushrooms, had high specificity toward O. japonicus, and had sufficient detection sensitivity even in a mixed mushroom sample containing 1% O. japonicus. Additionally, O. japonicus could be detected in simulated food poisoning samples of heated and digested mushrooms, and in actual food poisoning residual samples. Elsevier 2022-06-18 /pmc/articles/PMC9253582/ /pubmed/35800296 http://dx.doi.org/10.1016/j.fochms.2022.100115 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Sugano, Yohei
Sakata, Kozue
Nakamura, Kosuke
Hosokawa, Aoi
Kouguchi, Hirokazu
Suzuki, Tomohiro
Kondo, Kazunari
Loop-mediated isothermal amplification (LAMP) for rapid and easy identification of Omphalotus japonicus
title Loop-mediated isothermal amplification (LAMP) for rapid and easy identification of Omphalotus japonicus
title_full Loop-mediated isothermal amplification (LAMP) for rapid and easy identification of Omphalotus japonicus
title_fullStr Loop-mediated isothermal amplification (LAMP) for rapid and easy identification of Omphalotus japonicus
title_full_unstemmed Loop-mediated isothermal amplification (LAMP) for rapid and easy identification of Omphalotus japonicus
title_short Loop-mediated isothermal amplification (LAMP) for rapid and easy identification of Omphalotus japonicus
title_sort loop-mediated isothermal amplification (lamp) for rapid and easy identification of omphalotus japonicus
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9253582/
https://www.ncbi.nlm.nih.gov/pubmed/35800296
http://dx.doi.org/10.1016/j.fochms.2022.100115
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